RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SPERTQ8NA61 448 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 TEX47Q8TBZ9 253 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 REEP6Q96HR9 211 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 INTS14Q96SY0 518 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 NIPSNAP1Q9BPW8 284 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 MUC13Q9H3R2 512 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 C14orf119Q9NWQ9 140 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 KIF17Q9P2E2 1029 aa14.17□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF879B4DU55 563 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 SLC15A1P46059 708 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 MZT1Q08AG7 82 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 LINC01590Q5TEZ4 76 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 C16orf87Q6PH81 154 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 FAM57BQ71RH2 274 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 WDR86Q86TI4 376 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 OR10G2Q8NGC3 310 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 LRRC29Q8WV35 223 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 SPSB4Q96A44 273 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 TMIGD2Q96BF3 282 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 CCDC124Q96CT7 223 aaKnown RBP14.16□□□□□ -0.14
TRIM39-209ENST00000428728 TBX15Q96SF7 602 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 ABHD6Q9BV23 337 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 BRD7Q9NPI1 651 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 CMC2Q9NRP2 79 aa14.16□□□□□ -0.14
TRIM39-209ENST00000428728 SRRM5B3KS81 715 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 H3BN98 237 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 P2RY10O00398 339 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 FCN3O75636 299 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 MMP9P14780 707 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 DDOSTP39656 456 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 BLVRAP53004 296 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF121P58317 390 aaPredicted RBP14.15□□□□□ -0.14
TRIM39-209ENST00000428728 CSNK2BP67870 215 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 FAM3AP98173 230 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 MS4A2Q01362 244 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 METTL11BQ5VVY1 283 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 ARHGAP24Q8N264 748 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 FGFRL1Q8N441 504 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 PNLDC1Q8NA58 520 aaKnown RBP14.15□□□□□ -0.14
TRIM39-209ENST00000428728 ST8SIA4Q92187 359 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 WDFY2Q96P53 400 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 AMELYQ99218 206 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 TOR3AQ9H497 397 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 PPP1R3EQ9H7J1 279 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 ZNF696Q9H7X3 374 aa14.15□□□□□ -0.14
TRIM39-209ENST00000428728 CENPVL3A0A0U1RRI6 287 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 hCG_38984A0A1B0GV85 526 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 A0A1B0GW55 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 FAM181BA6NEQ2 426 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DVL1O14640 695 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 TNFRSF13BO14836 293 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 NDUFA2O43678 99 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L2P0CJ85 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L3P0CJ86 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L4P0CJ87 422 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L5P0CJ88 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L6P0CJ89 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L7P0CJ90 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 GSTT1P30711 240 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 ELF3P78545 371 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 TRIM25Q14258 630 aaKnown RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4L9Q6RFH8 374 aaPredicted RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 FIP1L1Q6UN15 594 aaKnown RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 BTN2A1Q7KYR7 527 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 GIPC3Q8TF64 312 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 RNF133Q8WVZ7 376 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 LHX4Q969G2 390 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 NSL1Q96IY1 281 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 FEVQ99581 238 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 PAPOLGQ9BWT3 736 aaKnown RBP14.14□□□□□ -0.15
TRIM39-209ENST00000428728 DUX4Q9UBX2 424 aa14.14□□□□□ -0.15
TRIM39-209ENST00000428728 MGAM2Q2M2H8 2515 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 POM121CA8CG34 1229 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 CRYBA1P05813 215 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 LIPFP07098 398 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 MELTFP08582 738 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 GRK5P34947 590 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 GNALP38405 381 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 GSK3AP49840 483 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 BPIFB3P59826 476 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 ARF6P62330 175 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 KLHL12Q53G59 568 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 TEX36Q5VZQ5 186 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 Q6YL49 198 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 PDZD9Q8IXQ8 264 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 GATAD2BQ8WXI9 593 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 SGK3Q96BR1 496 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 SEH1LQ96EE3 360 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 PGAM5Q96HS1 289 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 CLPTM1LQ96KA5 538 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 LRGUKQ96M69 825 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 CHIAQ9BZP6 476 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 SIRPDQ9H106 197 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 OR51V1Q9H2C8 321 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 PRDM13Q9H4Q3 707 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 SP140LQ9H930 580 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 NOX4Q9NPH5 578 aa14.13□□□□□ -0.15
TRIM39-209ENST00000428728 IGHV1-69DA0A0B4J2H0 117 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 SELENOFO60613 162 aa14.12□□□□□ -0.15
TRIM39-209ENST00000428728 GLCEO94923 617 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms