RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 A6NLC8 198 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 POM121CA8CG34 1229 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 ZNF878C9JN71 531 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 ATP8B1O43520 1251 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 TOX4O94842 621 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 MELTFP08582 738 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 AMY2BP19961 511 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 GNGT1P63211 74 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 CSNK2BP67870 215 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 MXRA7P84157 204 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 MICAQ29983 383 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 TEX36Q5VZQ5 186 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 LCN8Q6JVE9 175 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 DPY19L4Q7Z388 723 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 LINC00471Q8N535 108 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 IQCF1Q8N6M8 205 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 OR6K6Q8NGW6 343 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 ZDHHC16Q969W1 377 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 NOP16Q9Y3C1 178 aaKnown RBP12.83□□□□□ -0.36
SEC13-210ENST00000428626 NOTCH1P46531 2555 aa12.83□□□□□ -0.36
SEC13-210ENST00000428626 TRAV38-1A0A0B4J264 116 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 hCG_38984A0A1B0GV85 526 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 B2RBV5 119 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 P2RY10O00398 339 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 DVL1O14640 695 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 TBX1O43435 398 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 XRCC2O43543 280 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 CX3CR1P49238 355 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 EIF2B1Q14232 305 aaKnown RBP12.82□□□□□ -0.36
SEC13-210ENST00000428626 TAF13Q15543 124 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 OR2T5Q6IEZ7 315 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 FIP1L1Q6UN15 594 aaKnown RBP12.82□□□□□ -0.36
SEC13-210ENST00000428626 BTN2A1Q7KYR7 527 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 SPERTQ8NA61 448 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 OR2T33Q8NG76 320 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 OR2T29Q8NH02 315 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 RNF133Q8WVZ7 376 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 REEP6Q96HR9 211 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 ABHD6Q9BV23 337 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 FGF23Q9GZV9 251 aaPredicted RBP12.82□□□□□ -0.36
SEC13-210ENST00000428626 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 MAGIXQ9H6Y5 334 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 CMC2Q9NRP2 79 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 C1RLQ9NZP8 487 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 BAIAP2Q9UQB8 552 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 SAMHD1Q9Y3Z3 626 aaKnown RBP12.82□□□□□ -0.36
SEC13-210ENST00000428626 MMP24Q9Y5R2 645 aa12.82□□□□□ -0.36
SEC13-210ENST00000428626 TGP01266 2768 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 hCG_1807616A0A1W2PRN6 198 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 ZNF121P58317 390 aaPredicted RBP12.81□□□□□ -0.36
SEC13-210ENST00000428626 KRTAP10-3P60369 221 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 ARF6P62330 175 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 PRB3Q04118 309 aaPredicted RBP12.81□□□□□ -0.36
SEC13-210ENST00000428626 KCNJ8Q15842 424 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 CD276Q5ZPR3 534 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 TREML4Q6UXN2 200 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 WDR82Q6UXN9 313 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 FAM57BQ71RH2 274 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 TMEM179BQ7Z7N9 219 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 ERI1Q8IV48 349 aaKnown RBP12.81□□□□□ -0.36
SEC13-210ENST00000428626 PDZD9Q8IXQ8 264 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 TIGD4Q8IY51 512 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 KIR3DL3Q8N743 410 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 OR1M1Q8NGA1 313 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 OR6N2Q8NGY6 317 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 LRRC29Q8WV35 223 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 LHX4Q969G2 390 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 CCL13Q99616 98 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 OPA3Q9H6K4 179 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 NOX4Q9NPH5 578 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 NDE1Q9NXR1 346 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 DNAJC27Q9NZQ0 273 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 KAAG1Q9UBP8 84 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 RHBDD3Q9Y3P4 386 aa12.81□□□□□ -0.36
SEC13-210ENST00000428626 IGHV1-69DA0A0B4J2H0 117 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 A0A0U1RQK1 487 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 NDUFA2O43678 99 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 DCTN3O75935 186 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 IGHV1-69P01742 117 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 TFF1P04155 84 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 LIPFP07098 398 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 ANXA2P07355 339 aaKnown RBP12.8□□□□□ -0.36
SEC13-210ENST00000428626 T-ENOLP0DO92 83 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 SELLP14151 372 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 DDOSTP39656 456 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 OPRL1P41146 370 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 GSK3AP49840 483 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 DLX1P56177 255 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 BPIFB3P59826 476 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 GRB2P62993 217 aaKnown RBP12.8□□□□□ -0.36
SEC13-210ENST00000428626 TRIM25Q14258 630 aaKnown RBP12.8□□□□□ -0.36
SEC13-210ENST00000428626 WDR38Q5JTN6 314 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 CD300LDQ6UXZ3 194 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 DHFR2Q86XF0 187 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 FAM216BQ8N7L0 139 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 OR10G2Q8NGC3 310 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 WFDC12Q8WWY7 111 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 ST8SIA4Q92187 359 aa12.8□□□□□ -0.36
SEC13-210ENST00000428626 INTS14Q96SY0 518 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms