RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 PITPNBP48739 271 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 CRISP1P54107 249 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 HILS1P60008 231 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 FAM3AP98173 230 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 OR8B8Q15620 311 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 KCNJ8Q15842 424 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 SFRP4Q6FHJ7 346 aaPredicted RBP15.41■□□□□ 0.06
GPC1-205ENST00000427506 LYPD2Q6UXB3 125 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 DCDC5Q6ZRR9 648 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 USP43Q70EL4 1123 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 BBS1Q8NFJ9 593 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 OR5K1Q8NHB7 308 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 ZFAND2BQ8WV99 257 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 MMADHCQ9H3L0 296 aaPredicted RBP15.41■□□□□ 0.06
GPC1-205ENST00000427506 CLN8Q9UBY8 286 aa15.41■□□□□ 0.06
GPC1-205ENST00000427506 hCG_1807616A0A1W2PRN6 198 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 TRIM77I1YAP6 450 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 ATP5HO75947 161 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 FSHBP01225 129 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 CD80P33681 288 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 GNALP38405 381 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 APOFQ13790 326 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 LRRN1Q6UXK5 716 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 LAMP5Q9UJQ1 280 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 NUP50Q9UKX7 468 aa15.4■□□□□ 0.06
GPC1-205ENST00000427506 STAB1Q9NY15 2570 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 ARHGAP32A7KAX9 2087 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 hCG_38984A0A1B0GV85 526 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 C3orf80F5H4A9 247 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 HAX1O00165 279 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 LGALS8O00214 317 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 PTBP3O95758 552 aaKnown RBP15.39■□□□□ 0.05
GPC1-205ENST00000427506 GSK3AP49840 483 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 DAPP51397 102 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 ACTG1P63261 375 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 HOXA4Q00056 320 aaPredicted RBP15.39■□□□□ 0.05
GPC1-205ENST00000427506 C1orf146Q5VVC0 180 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 FAHD1Q6P587 224 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 RBMS3Q6XE24 437 aaKnown RBP15.39■□□□□ 0.05
GPC1-205ENST00000427506 ZNF826PQ6ZT77 177 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 PRSS45Q7RTY3 260 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 KRT77Q7Z794 578 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 RAB40AQ8WXH6 277 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 UTP4Q969X6 686 aaKnown RBP15.39■□□□□ 0.05
GPC1-205ENST00000427506 PRRG3Q9BZD7 231 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 TRIM36Q9NQ86 728 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 ZNF319Q9P2F9 582 aa15.39■□□□□ 0.05
GPC1-205ENST00000427506 IGHV2-70DA0A0C4DH43 119 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 G3V2T6 193 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 HCCSP53701 268 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 PAX8Q06710 450 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 PTGES3Q15185 160 aaKnown RBP15.38■□□□□ 0.05
GPC1-205ENST00000427506 SNCBQ16143 134 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 LCN1P1Q5VSP4 162 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 FTMTQ8N4E7 242 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 CSNK2A3Q8NEV1 391 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 TECTBQ96PL2 329 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 PAPOLGQ9BWT3 736 aaKnown RBP15.38■□□□□ 0.05
GPC1-205ENST00000427506 RGCCQ9H4X1 137 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 NIPAL2Q9H841 368 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 KRT84Q9NSB2 600 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 ERVK-18Q9QC07 812 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 KLHDC2Q9Y2U9 406 aa15.38■□□□□ 0.05
GPC1-205ENST00000427506 TRAV38-1A0A0B4J264 116 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 OOEPA6NGQ2 149 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 PHYHO14832 338 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 MRPL3P09001 348 aaKnown RBP15.37■□□□□ 0.05
GPC1-205ENST00000427506 SLC2A5P22732 501 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 FASP25445 335 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 ESRRGP62508 458 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 PAX2Q02962 417 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 ATP6AP1Q15904 470 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 WDR25Q64LD2 544 aaPredicted RBP15.37■□□□□ 0.05
GPC1-205ENST00000427506 KCTD18Q6PI47 426 aaPredicted RBP15.37■□□□□ 0.05
GPC1-205ENST00000427506 C12orf54Q6X4T0 127 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 PARP8Q8N3A8 854 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 TEAD3Q99594 435 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 NUDT16L1Q9BRJ7 211 aaKnown RBP15.37■□□□□ 0.05
GPC1-205ENST00000427506 YIPF3Q9GZM5 350 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 RHBDD3Q9Y3P4 386 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 LRP12Q9Y561 859 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 AP4S1Q9Y587 144 aa15.37■□□□□ 0.05
GPC1-205ENST00000427506 KIR2DS1A0A191URI9 304 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 ANXA2P2A6NMY6 339 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 ADAM20O43506 726 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 NDUFA2O43678 99 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 ALOX5APP20292 161 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 PSMB10P40306 273 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 NPY4RP50391 375 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 PSMA6P60900 246 aaKnown RBP15.36■□□□□ 0.05
GPC1-205ENST00000427506 KLF17Q5JT82 389 aaPredicted RBP15.36■□□□□ 0.05
GPC1-205ENST00000427506 ZNF841Q6ZN19 808 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 ZDHHC13Q8IUH4 622 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 GCSAMQ8N6F7 178 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 SIGLECL1Q8N7X8 197 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 MICU1Q9BPX6 476 aa15.36■□□□□ 0.05
GPC1-205ENST00000427506 MS4A7Q9GZW8 240 aaPredicted RBP15.36■□□□□ 0.05
GPC1-205ENST00000427506 H2AFY2Q9P0M6 372 aaPredicted RBP15.36■□□□□ 0.05
GPC1-205ENST00000427506 ZNF69Q9UC07 566 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms