RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 COPS4Q9BT78 406 aa8.3□□□□□ -1.08
GACAT3-201ENST00000426539 FAM107BQ9H098 131 aa8.3□□□□□ -1.08
GACAT3-201ENST00000426539 VNN3Q9NY84 501 aa8.3□□□□□ -1.08
GACAT3-201ENST00000426539 NOP16Q9Y3C1 178 aaKnown RBP8.3□□□□□ -1.08
GACAT3-201ENST00000426539 TRAV38-1A0A0B4J264 116 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TCRBV5S2A0A599 114 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 A6NLC8 198 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TNFRSF11BO00300 401 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF593O00488 134 aaPredicted RBP8.29□□□□□ -1.08
GACAT3-201ENST00000426539 DVL1O14640 695 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 KRT36O76013 467 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 KNG1P01042 644 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 LIPFP07098 398 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SPI1P17947 270 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 AMY2BP19961 511 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 MAGEA2P43356 314 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ENTPD1P49961 510 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SLC25A1P53007 311 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ARF6P62330 175 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 FAM3AP98173 230 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 KCNJ8Q15842 424 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 KLHL12Q53G59 568 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 PDLIM3Q53GG5 364 aaPredicted RBP8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TEX30Q5JUR7 227 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 LINC01590Q5TEZ4 76 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 OLFML2AQ68BL7 652 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 RPL13AP3Q6NVV1 102 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 BTN2A1Q7KYR7 527 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 RHOUQ7L0Q8 258 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SLC16A9Q7RTY1 509 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SPERTQ8NA61 448 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 OR4F5Q8NH21 305 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 LHX4Q969G2 390 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SGK3Q96BR1 496 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 SEH1LQ96EE3 360 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 FAM71F1Q96KD3 344 aaPredicted RBP8.29□□□□□ -1.08
GACAT3-201ENST00000426539 CITED1Q99966 193 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TSSK6Q9BXA6 273 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TRIM15Q9C019 465 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 BEX1Q9HBH7 125 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 CENPMQ9NSP4 180 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ACOXLQ9NUZ1 547 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ARMC1Q9NVT9 282 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF319Q9P2F9 582 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 KAAG1Q9UBP8 84 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 TAGLN3Q9UI15 199 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 N6AMT1Q9Y5N5 214 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 PKD1L1Q8TDX9 2849 aa8.29□□□□□ -1.08
GACAT3-201ENST00000426539 A0A0U1RQK1 487 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 A0A1B0GUS0 222 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 hCG_38984A0A1B0GV85 526 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 hCG_1807616A0A1W2PRN6 198 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 DHRS12A0PJE2 317 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 ZNF878C9JN71 531 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 XRCC2O43543 280 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 NDUFA2O43678 99 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 CCNB2O95067 398 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 SOX14O95416 240 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 IGHV4-59P01825 116 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 FMO3P31513 532 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 CSNK2BP67870 215 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 PDCD1Q15116 288 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 OCLNQ16625 522 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 METTL11BQ5VVY1 283 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 CYP2R1Q6VVX0 501 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 PDZD9Q8IXQ8 264 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 DEFB107AQ8IZN7 70 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 PNLDC1Q8NA58 520 aaKnown RBP8.28□□□□□ -1.08
GACAT3-201ENST00000426539 AQP11Q8NBQ7 271 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 LY6G5BQ8NDX9 201 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 OR1M1Q8NGA1 313 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 GATAD2BQ8WXI9 593 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 AMELYQ99218 206 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 TRIM36Q9NQ86 728 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 TBC1D23Q9NUY8 699 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 C14orf119Q9NWQ9 140 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 RPUSD1Q9UJJ7 312 aaKnown RBP8.28□□□□□ -1.08
GACAT3-201ENST00000426539 POMT1Q9Y6A1 747 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 DOCK11Q5JSL3 2073 aa8.28□□□□□ -1.08
GACAT3-201ENST00000426539 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.27□□□□□ -1.09
GACAT3-201ENST00000426539 ANKRD30BLA7E2S9 258 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 TBX1O43435 398 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 GPR137BO60478 399 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 CRYBA1P05813 215 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 DDOSTP39656 456 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 IER3P46695 156 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 CX3CR1P49238 355 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 DLX1P56177 255 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 PRB3Q04118 309 aaPredicted RBP8.27□□□□□ -1.09
GACAT3-201ENST00000426539 EIF2B1Q14232 305 aaKnown RBP8.27□□□□□ -1.09
GACAT3-201ENST00000426539 TAF13Q15543 124 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 MIDNQ504T8 468 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 WDR38Q5JTN6 314 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 WDR82Q6UXN9 313 aa8.27□□□□□ -1.09
GACAT3-201ENST00000426539 LDLRAD3Q86YD5 345 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms