RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 TRUB1Q8WWH5 349 aaKnown RBP10.69□□□□□ -0.7
GPC1-204ENST00000426280 SPTSSAQ969W0 71 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 CNN2Q99439 309 aaKnown RBP10.69□□□□□ -0.7
GPC1-204ENST00000426280 ADI1Q9BV57 179 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 METTL17Q9H7H0 456 aaPredicted RBP10.69□□□□□ -0.7
GPC1-204ENST00000426280 PATZ1Q9HBE1 687 aaKnown RBP10.69□□□□□ -0.7
GPC1-204ENST00000426280 ADGRL4Q9HBW9 690 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 UFSP2Q9NUQ7 469 aa10.69□□□□□ -0.7
GPC1-204ENST00000426280 F5H0A9 414 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 MAGEB4O15481 346 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 RGS9O75916 674 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 GNAO1P09471 354 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 WNT2P09544 360 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 ALOX5APP20292 161 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 TNFSF4P23510 183 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 SRP14P37108 136 aaKnown RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 OPRL1P41146 370 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 CX3CR1P49238 355 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 FAM3AP98173 230 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 IL5RAQ01344 420 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 TAF13Q15543 124 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 OCLNQ16625 522 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 ZNF691Q5VV52 312 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 TTC23Q5W5X9 447 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 ZNF826PQ6ZT77 177 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 MRPL21Q7Z2W9 205 aaKnown RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 WDR86Q86TI4 376 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 SPRYD4Q8WW59 207 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 PPP1R14AQ96A00 147 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 SPSB4Q96A44 273 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 TBX5Q99593 518 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 YIPF3Q9GZM5 350 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 FGF23Q9GZV9 251 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 AMBNQ9NP70 447 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 BRD7Q9NPI1 651 aa10.68□□□□□ -0.7
GPC1-204ENST00000426280 WARS2Q9UGM6 360 aaKnown RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 SOX21Q9Y651 276 aaPredicted RBP10.68□□□□□ -0.7
GPC1-204ENST00000426280 TRAV20A0A0B4J274 112 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 GGT3PA6NGU5 568 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 CEACAM18A8MTB9 384 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 ZNF878C9JN71 531 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 TBX1O43435 398 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 FAM20BO75063 409 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 WBP4O75554 376 aaKnown RBP10.67□□□□□ -0.7
GPC1-204ENST00000426280 FCN3O75636 299 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 VENTXO95231 258 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 LYNP07948 512 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 CAPGP40121 348 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 ZNF121P58317 390 aaPredicted RBP10.67□□□□□ -0.7
GPC1-204ENST00000426280 SLC3A1Q07837 685 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 MALLQ13021 153 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 SMN1Q16637 294 aaKnown RBP10.67□□□□□ -0.7
GPC1-204ENST00000426280 SLC25A30Q5SVS4 291 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 LRRN1Q6UXK5 716 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 FAM57BQ71RH2 274 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 SSX6Q7RTT6 188 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 C11orf53Q8IXP5 236 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 SLC35F2Q8IXU6 374 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 OR56B2PQ8NGI1 322 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 CNIH3Q8TBE1 160 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 RAB39BQ96DA2 213 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 RNFT2Q96EX2 444 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 LYZL4Q96KX0 146 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 APOL4Q9BPW4 351 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 TMEM246Q9BRR3 403 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 VCXQ9H320 206 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 HAO2Q9NYQ3 351 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 LAMP5Q9UJQ1 280 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 MXRA5Q9NR99 2828 aa10.67□□□□□ -0.7
GPC1-204ENST00000426280 PNPP00491 289 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 ANXA2P07355 339 aaKnown RBP10.66□□□□□ -0.7
GPC1-204ENST00000426280 H2BFMP0C1H6 154 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 HNF1AP20823 631 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 THBS2P35442 1172 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 CD200P41217 278 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 GATA4P43694 442 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 SRP9P49458 86 aaKnown RBP10.66□□□□□ -0.7
GPC1-204ENST00000426280 ISL1P61371 349 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 PAX2Q02962 417 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 ZNF91Q05481 1191 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 POU4F2Q12837 409 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 TMEM155Q4W5P6 130 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 MEDAGQ5VYS4 303 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 PEG10Q86TG7 708 aaKnown RBP10.66□□□□□ -0.7
GPC1-204ENST00000426280 ZNF454Q8N9F8 522 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 TFAP2CQ92754 450 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 RFKQ969G6 155 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 CLN6Q9NWW5 311 aa10.66□□□□□ -0.7
GPC1-204ENST00000426280 hCG_38984A0A1B0GV85 526 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 H0YAE9 185 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 TNFRSF13BO14836 293 aaPredicted RBP10.65□□□□□ -0.7
GPC1-204ENST00000426280 MPZL2O60487 215 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 PTBP3O95758 552 aaKnown RBP10.65□□□□□ -0.7
GPC1-204ENST00000426280 FSHBP01225 129 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 GRPP07492 148 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 DBTP11182 482 aaKnown RBP10.65□□□□□ -0.7
GPC1-204ENST00000426280 EGR1P18146 543 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 ACKR3P25106 362 aa10.65□□□□□ -0.7
GPC1-204ENST00000426280 HSD11B1P28845 292 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms