RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 C9orf106Q8NAJ2 232 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 OR51A4Q8NGJ6 313 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 WNT2BQ93097 391 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 SNRNP40Q96DI7 357 aaKnown RBP13.15□□□□□ -0.3
CALD1-206ENST00000424922 SLAMF6Q96DU3 332 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 OR51J1Q9H342 316 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 PRORYQ9H606 182 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 HRASLSQ9HDD0 168 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 SLC17A5Q9NRA2 495 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 GLRX2Q9NS18 164 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 TMEM38BQ9NVV0 291 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 UPB1Q9UBR1 384 aa13.15□□□□□ -0.3
CALD1-206ENST00000424922 ANKRD20A5PA0PJZ0 165 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 OR6C65A6NJZ3 312 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 RER1O15258 196 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 SS18L1O75177 396 aaPredicted RBP13.14□□□□□ -0.31
CALD1-206ENST00000424922 PNPP00491 289 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 MAS1P04201 325 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 B4GALT1P15291 398 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 CDK2P24941 298 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 TDGF1P3P51864 188 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 TAS2R20P59543 309 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
CALD1-206ENST00000424922 GSG1Q2KHT4 349 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 PRR30Q53SZ7 412 aaPredicted RBP13.14□□□□□ -0.31
CALD1-206ENST00000424922 C9orf135Q5VTT2 229 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 ARL6IP6Q8N6S5 226 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 OR10S1Q8NGN2 331 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 GRPEL2Q8TAA5 225 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 RNF133Q8WVZ7 376 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 FOXB1Q99853 325 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 NUP50Q9UKX7 468 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 R4GMQ9 66 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 ITPR1Q14643 2758 aa13.14□□□□□ -0.31
CALD1-206ENST00000424922 ZNF587BE7ETH6 402 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 XRCC3O43542 346 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 PRAF2O60831 178 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 MT-ND4P03905 459 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 ISG15P05161 165 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
CALD1-206ENST00000424922 FCN2Q15485 313 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 FAM27BQ5VT28 67 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 NSUN5P2Q63ZY6 315 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 FAM166AQ6J272 317 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 CD163Q86VB7 1156 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.13□□□□□ -0.31
CALD1-206ENST00000424922 KDF1Q8NAX2 398 aaPredicted RBP13.13□□□□□ -0.31
CALD1-206ENST00000424922 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 HYLS1Q96M11 299 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 PTTG3PQ9NZH4 202 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 PRSS50Q9UI38 385 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 FBXL3Q9UKT7 428 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 SLC22A13Q9Y226 551 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 SLC17A2O00624 439 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 CD2P06729 351 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 H2BFMP0C1H6 154 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 CCR6P51684 374 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 CLVS2Q5SYC1 327 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 ANKRD16Q6P6B7 361 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 SERPINA12Q8IW75 414 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 MARVELD3Q96A59 401 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 FBXO17Q96EF6 278 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 PLSCR3Q9NRY6 295 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 ASF1BQ9NVP2 202 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 DHDHQ9UQ10 334 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 BOLA1Q9Y3E2 137 aa13.13□□□□□ -0.31
CALD1-206ENST00000424922 RPL36A-HNRNPH2H7BZ11 118 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 ABOP16442 354 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 IGFBP3P17936 291 aaPredicted RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 PSMB1P20618 241 aaKnown RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 ACHEP22303 614 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 FOXG1P55316 489 aaPredicted RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 S100A12P80511 92 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 MFGE8Q08431 387 aaPredicted RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 IGSF11Q5DX21 431 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 ZNF813Q6ZN06 617 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 FAM214BQ7L5A3 538 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 SLC22A24Q8N4F4 322 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 CNEP1R1Q8N9A8 125 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 ASB5Q8WWX0 329 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 GTF2A1LQ9UNN4 478 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 NBEAQ8NFP9 2946 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 TRIM77I1YAP6 450 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 NDUFA2O43678 99 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 WDR1O75083 606 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 GABRA1P14867 456 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 OR3A2P47893 321 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 ARF1P84077 181 aaKnown RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 GUSBP1Q15486 140 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 RAB11BQ15907 218 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 Q5BKY6 102 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 RTL6Q6ICC9 239 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 KLHL24Q6TFL4 600 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 ZNF704Q6ZNC4 412 aaPredicted RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 UTS2BQ765I0 119 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 GJC3Q8NFK1 279 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 FAM57AQ8TBR7 257 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 C20orf85Q9H1P6 137 aa13.12□□□□□ -0.31
CALD1-206ENST00000424922 PNRC2Q9NPJ4 139 aaKnown RBP13.12□□□□□ -0.31
CALD1-206ENST00000424922 CKLFQ9UBR5 152 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms