RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 BPIFB2Q8N4F0 458 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 OR13G1Q8NGZ3 307 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 PGAM5Q96HS1 289 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 TMEM165Q9HC07 324 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 GCM1Q9NP62 436 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 TMEM100Q9NV29 134 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 LAMP5Q9UJQ1 280 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 NUP50Q9UKX7 468 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 ORC6Q9Y5N6 252 aa10.86□□□□□ -0.67
VRK3-203ENST00000424804 ZAR1LA6NP61 321 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 IQCF6A8MYZ5 107 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 F5H5P2 479 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 PSMD9O00233 223 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 PRTN3P24158 256 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 FPR2P25090 351 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 POLR2IP36954 125 aaKnown RBP10.85□□□□□ -0.67
VRK3-203ENST00000424804 PCK2Q16822 640 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 ZIK1Q3SY52 487 aaPredicted RBP10.85□□□□□ -0.67
VRK3-203ENST00000424804 ZFP1Q6P2D0 407 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 LRRN1Q6UXK5 716 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 KRT77Q7Z794 578 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 C10orf67Q8IYJ2 551 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 OTOSQ8NHW6 89 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
VRK3-203ENST00000424804 TAF15Q92804 592 aaKnown RBP eCLIP10.85□□□□□ -0.67
VRK3-203ENST00000424804 RBM4BQ9BQ04 359 aaKnown RBP10.85□□□□□ -0.67
VRK3-203ENST00000424804 TOR3AQ9H497 397 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 MARCH7Q9H992 704 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.85□□□□□ -0.67
VRK3-203ENST00000424804 PPP1R3CQ9UQK1 317 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 KLHDC2Q9Y2U9 406 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 PCDHGB1Q9Y5G3 927 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 AUP1Q9Y679 476 aa10.85□□□□□ -0.67
VRK3-203ENST00000424804 DNAJC9-AS1A6NH13 148 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 CEACAM18A8MTB9 384 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 H3BNX3 289 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 EI24O14681 340 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 TMPRSS2O15393 492 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 MLNRO43193 412 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 BAG2O95816 211 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 SLC2A5P22732 501 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 CA6P23280 308 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 OTX1P32242 354 aaPredicted RBP10.84□□□□□ -0.67
VRK3-203ENST00000424804 SRP9P49458 86 aaKnown RBP10.84□□□□□ -0.67
VRK3-203ENST00000424804 MMP16P51512 607 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 ZNF121P58317 390 aaPredicted RBP10.84□□□□□ -0.67
VRK3-203ENST00000424804 OR8G1Q15617 311 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 PRR31Q5SQ13 230 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 C12orf73Q69YU5 71 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 SLC16A9Q7RTY1 509 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 SPICQ8N5J4 248 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 ZNF454Q8N9F8 522 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 TMEM163Q8TC26 289 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 RNF133Q8WVZ7 376 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 MEGF10Q96KG7 1140 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 DUX5Q96PT3 197 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 CNN2Q99439 309 aaKnown RBP10.84□□□□□ -0.67
VRK3-203ENST00000424804 TEAD3Q99594 435 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 SLC30A2Q9BRI3 323 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 OSBPL10Q9BXB5 764 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 SP140LQ9H930 580 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 IKZF2Q9UKS7 526 aa10.84□□□□□ -0.67
VRK3-203ENST00000424804 PRKDCP78527 4128 aaKnown RBP10.84□□□□□ -0.67
VRK3-203ENST00000424804 CCDC182A6NF36 153 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 CD300LBA8K4G0 201 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 XRCC2O43543 280 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 ZNF205O95201 554 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 CYB5R3P00387 301 aaPredicted RBP10.83□□□□□ -0.68
VRK3-203ENST00000424804 APOC1P02654 83 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 IGHV4-38-2P0DP08 117 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 OPRL1P41146 370 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 FAM201AQ5SY85 155 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 PRAMEF6Q5VXH4 476 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 C9orf139Q6ZV77 190 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 MEPCEQ7L2J0 689 aaKnown RBP10.83□□□□□ -0.68
VRK3-203ENST00000424804 MOGAT3Q86VF5 341 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 KLHL36Q8N4N3 616 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 OR56B2PQ8NGI1 322 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 FAM81AQ8TBF8 368 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 STMN2Q93045 179 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 REEP6Q96HR9 211 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 ADAT1Q9BUB4 502 aaKnown RBP10.83□□□□□ -0.68
VRK3-203ENST00000424804 OR10A2Q9H208 303 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 ZNF696Q9H7X3 374 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 S100A14Q9HCY8 104 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 UFSP2Q9NUQ7 469 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 GTF2A1LQ9UNN4 478 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 LRP12Q9Y561 859 aa10.83□□□□□ -0.68
VRK3-203ENST00000424804 SLC22A31A6NKX4 558 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 APOL3O95236 402 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 FSTL3O95633 263 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 PLATP00750 562 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 MDH2P40926 338 aaKnown RBP10.82□□□□□ -0.68
VRK3-203ENST00000424804 FOXL1Q12952 345 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 SLC9A3R2Q15599 337 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 NXNL2Q5VZ03 156 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 KCTD18Q6PI47 426 aaPredicted RBP10.82□□□□□ -0.68
VRK3-203ENST00000424804 ZNF841Q6ZN19 808 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 COMMD2Q86X83 199 aa10.82□□□□□ -0.68
VRK3-203ENST00000424804 GID4Q8IVV7 300 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms