RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 APOC1P02654 83 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 NME2P22392 152 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 LPAR6P43657 344 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 HSPB2Q16082 182 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 THRSPQ92748 146 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 OR10C1Q96KK4 312 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 SOX7Q9BT81 388 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 SEC11CQ9BY50 192 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 C5orf66Q9H5L9 145 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 U3KQA8 63 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 TRAV36DV7A0A075B6V5 113 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 LOC390937A0A1W2PQ73 354 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 COLCA2A8K830 154 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 SFTA3P0C7M3 94 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 ANOS1P23352 680 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 ARL4DP49703 201 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 SPEM2Q0P670 501 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 HABP2Q14520 560 aaPredicted RBP12.72□□□□□ -0.37
MSH5-206ENST00000423982 PEAR1Q5VY43 1037 aaPredicted RBP12.72□□□□□ -0.37
MSH5-206ENST00000423982 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
MSH5-206ENST00000423982 TMEM104Q8NE00 496 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 OR4K15Q8NH41 348 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.72□□□□□ -0.37
MSH5-206ENST00000423982 LAT2Q9GZY6 243 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 LPAR3Q9UBY5 353 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 RAB22AQ9UL26 194 aa12.72□□□□□ -0.37
MSH5-206ENST00000423982 ZNF292O60281 2723 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 A0A0A6YYD4 124 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 LRP3O75074 770 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 CD37P11049 281 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 ANKRD55Q3KP44 614 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 RPL7L1Q6DKI1 246 aaKnown RBP12.71□□□□□ -0.37
MSH5-206ENST00000423982 DRAM2Q6UX65 266 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 DUSP23Q9BVJ7 150 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 TXNIPQ9H3M7 391 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 PCDHGA1Q9Y5H4 931 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 MED12Q93074 2177 aa12.71□□□□□ -0.37
MSH5-206ENST00000423982 C2orf72A6NCS6 295 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 TO15178 435 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 CD80P33681 288 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 F2RL1P55085 397 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 CCL7P80098 99 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 QRFPP83859 136 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 RAB32Q13637 225 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 EBPQ15125 230 aaKnown RBP12.71□□□□□ -0.38
MSH5-206ENST00000423982 SGCBQ16585 318 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 PHF19Q5T6S3 580 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 DMBX1Q8NFW5 382 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 MAFIPQ8WZ33 124 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 ZDHHC12Q96GR4 267 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 CCNL2Q96S94 520 aaPredicted RBP12.71□□□□□ -0.38
MSH5-206ENST00000423982 UQCC2Q9BRT2 126 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 BANF2Q9H503 90 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 PLA2G2EQ9NZK7 142 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 GSKIPQ9P0R6 139 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 PRODH2Q9UF12 536 aa12.71□□□□□ -0.38
MSH5-206ENST00000423982 CNTRLQ7Z7A1 2325 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 TRBV6-7A0A0A0MS04 114 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 A0A1W2PPE3 182 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 MEGF11A6BM72 1044 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 SOCS1O15524 211 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 FBXO24O75426 580 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 HTR3BO95264 441 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 EFNA3P52797 238 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 GLO1Q04760 184 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 CLEC18BQ6UXF7 455 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 HOGA1Q86XE5 327 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 PRSS58Q8IYP2 241 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 ST7LQ8TDW4 575 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 CLCC1Q96S66 551 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 VSX1Q9NZR4 365 aaPredicted RBP12.7□□□□□ -0.38
MSH5-206ENST00000423982 ZNF107Q9UII5 783 aaPredicted RBP12.7□□□□□ -0.38
MSH5-206ENST00000423982 A0A0A6YYH2 397 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 A0A1W2PQM1 296 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 TLCD2A6NGC4 264 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 A6NJ64 397 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 SDCBPO00560 298 aaPredicted RBP12.7□□□□□ -0.38
MSH5-206ENST00000423982 OR1D4P47884 311 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 CLDN6P56747 220 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 FOXL2P58012 376 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 S100A10P60903 97 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 SUPT4H1P63272 117 aaKnown RBP12.7□□□□□ -0.38
MSH5-206ENST00000423982 PEA15Q15121 130 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 PLAC9Q5JTB6 97 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 ANGPTL5Q86XS5 388 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 ZNF101Q8IZC7 436 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 IFI44Q8TCB0 444 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 C14orf79Q96F83 325 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 PDE7BQ9NP56 450 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 MED29Q9NX70 200 aa12.7□□□□□ -0.38
MSH5-206ENST00000423982 DCHS1Q96JQ0 3298 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 TMED7-TICAM2A0A0A6YYA0 188 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 RNASEK-C17orf49H0YIS7 233 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 GDF9O60383 454 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 MED6O75586 246 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 RAD51DO75771 328 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 PPT1P50897 306 aa12.69□□□□□ -0.38
MSH5-206ENST00000423982 NR0B1P51843 470 aaKnown RBP12.69□□□□□ -0.38
MSH5-206ENST00000423982 AWAT2Q6E213 333 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms