RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 SRA1Q9HD15 236 aaKnown RBP13.63□□□□□ -0.23
CHCHD3-202ENST00000423635 ADARB2-AS1A8MUL3 147 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 M0R135 149 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 M0R1W7 72 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 ACOT8O14734 319 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 CD28P10747 220 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 LY6EQ16553 131 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 LRRC10Q5BKY1 277 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 LIAT1Q6ZQX7 453 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 VTCN1Q7Z7D3 282 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 OR51G2Q8NGK0 314 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 OR2AE1Q8NHA4 323 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 WIPF2Q8TF74 440 aaPredicted RBP13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 LRRC29Q8WV35 223 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 C17orf50Q8WW18 174 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 ZNF799Q96GE5 643 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 FAM46AQ96IP4 442 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 NPFFR1Q9GZQ6 430 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 ADA2Q9NZK5 511 aa13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 SF3B6Q9Y3B4 125 aaKnown RBP13.62□□□□□ -0.23
CHCHD3-202ENST00000423635 FAM220BPB1ANY3 271 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 ANOS1P23352 680 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 OTX1P32242 354 aaPredicted RBP13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 LRRC75BQ2VPJ9 315 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 COQ5Q5HYK3 327 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 GLYATL3Q5SZD4 288 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 HCP5Q6MZN7 132 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 PGBD2Q6P3X8 592 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 WDR86Q86TI4 376 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 ZBTB46Q86UZ6 589 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 RORBQ92753 470 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 SPTSSAQ969W0 71 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 MAP6Q96JE9 813 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 DNTTIP1Q9H147 329 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 SERTAD4Q9NUC0 356 aa13.61□□□□□ -0.23
CHCHD3-202ENST00000423635 DDOSTP39656 456 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 OMPP47874 163 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 IKZF1Q13422 519 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 METTL21CQ5VZV1 264 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 STUMQ69YW2 141 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 WDR82Q6UXN9 313 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 Q8N2B8 174 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 PAPD5Q8NDF8 572 aaKnown RBP13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 OR2T12Q8NG77 320 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 OR1M1Q8NGA1 313 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 OR56B2PQ8NGI1 322 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 PIFOQ8TCI5 191 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 SEH1LQ96EE3 360 aa13.6□□□□□ -0.23
CHCHD3-202ENST00000423635 NAA10P41227 235 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 DRAM2Q6UX65 266 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 DPY19L4Q7Z388 723 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 OR9Q1Q8NGQ5 310 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 RSRC1Q96IZ7 334 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 NMNAT3Q96T66 252 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 CITED2Q99967 270 aaPredicted RBP13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 OPA3Q9H6K4 179 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 ZNF702PQ9H963 129 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 MRPL22Q9NWU5 206 aaKnown RBP13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 KCNG2Q9UJ96 466 aa13.59□□□□□ -0.23
CHCHD3-202ENST00000423635 ARPC3O15145 178 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 CHST1O43916 411 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 TIPRLO75663 272 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 RENP00797 406 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 SELLP14151 372 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 IGLL1P15814 213 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 BLMHQ13867 455 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 IFI44LQ53G44 452 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 CCBE1Q6UXH8 406 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 ZNF788Q6ZQV5 615 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 OR5T2Q8NGG2 359 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 OR8S1Q8NH09 359 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 H1FXQ92522 213 aaKnown RBP13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 SPSB4Q96A44 273 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 TLNRD1Q9H1K6 362 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 HAO2Q9NYQ3 351 aa13.58□□□□□ -0.24
CHCHD3-202ENST00000423635 A0A1W2PRQ8 180 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 ANKRD30BLA7E2S9 258 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 FAHP16930 419 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 CD33P20138 364 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 CAV3P56539 151 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 DGCR6Q14129 220 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 DEFB121Q5J5C9 76 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 CBLL1Q75N03 491 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 OR5D13Q8NGL4 314 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 DUS3LQ96G46 650 aaKnown RBP13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 MED30Q96HR3 178 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 OCSTAMPQ9BR26 566 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 WNT10AQ9GZT5 417 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 RPRD1BQ9NQG5 326 aaKnown RBP13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 SLC25A10Q9UBX3 287 aaPredicted RBP13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 CAPN7Q9Y6W3 813 aa13.57□□□□□ -0.24
CHCHD3-202ENST00000423635 UNC119BA6NIH7 251 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 CDIPTO14735 213 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 HLA-DQA2P01906 255 aa13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 TROVE2P10155 538 aaKnown RBP eCLIP13.56□□□□□ -0.24
CHCHD3-202ENST00000423635 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms