RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 OR8S1Q8NH09 359 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 RFKQ969G6 155 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 SGK3Q96BR1 496 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 C9orf16Q9BUW7 83 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 FN3KRPQ9HA64 309 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 C14orf119Q9NWQ9 140 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 HIF1ANQ9NWT6 349 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 USE1Q9NZ43 259 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 WARS2Q9UGM6 360 aaKnown RBP9.23□□□□□ -0.93
USP49-204ENST00000423567 ZNF391Q9UJN7 358 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 KLHDC2Q9Y2U9 406 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 LRP12Q9Y561 859 aa9.23□□□□□ -0.93
USP49-204ENST00000423567 ZFHX3Q15911 3703 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 TMEM269A0A1B0GVZ9 245 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 C5orf63A6NC05 138 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 ACOD1A6NK06 481 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 CYB5R3P00387 301 aaPredicted RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 IGHV2-70P01814 119 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 DCTDP32321 178 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 POLR2IP36954 125 aaKnown RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 HCCSP53701 268 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 CXCR4P61073 352 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 EFNB1P98172 346 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 FAM3AP98173 230 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 TMED1Q13445 227 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 ZNF181Q2M3W8 571 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 ZNF322Q6U7Q0 402 aaPredicted RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 PRSS45Q7RTY3 260 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 LRRC28Q86X40 367 aaPredicted RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 ZNF679Q8IYX0 411 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 PQLC1Q8N2U9 271 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 CBR4Q8N4T8 237 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 TEX29Q8N6K0 151 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 PLPP7Q8NBV4 271 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 OR51G2Q8NGK0 314 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 ZNF420Q8TAQ5 688 aaPredicted RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 FAM81AQ8TBF8 368 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 TRUB1Q8WWH5 349 aaKnown RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 OR8B4Q96RC9 309 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 PAPOLGQ9BWT3 736 aaKnown RBP9.22□□□□□ -0.93
USP49-204ENST00000423567 UFSP2Q9NUQ7 469 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 CLN6Q9NWW5 311 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 DCAF16Q9NXF7 216 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 HAO2Q9NYQ3 351 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 NAV3Q8IVL0 2385 aa9.22□□□□□ -0.93
USP49-204ENST00000423567 PPIAL4EA0A075B759 164 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 A0A0G2JMP0 313 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 A0A0X1KG70 313 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 hCG_38984A0A1B0GV85 526 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 A6NLC8 198 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ANXA2P2A6NMY6 339 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 SNTNA6NMZ2 147 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PPIAL4DF5H284 164 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PSMD9O00233 223 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PLPP2O43688 288 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 FOXH1O75593 365 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 BAG2O95816 211 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PPIAL4FP0DN26 164 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ANOS1P23352 680 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 HTR1FP30939 366 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 GSK3AP49840 483 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ROM1Q03395 351 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 MAB21L1Q13394 359 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ZMYND11Q15326 602 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ZIK1Q3SY52 487 aaPredicted RBP9.21□□□□□ -0.94
USP49-204ENST00000423567 PRAMEF6Q5VXH4 476 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 FAHD2BQ6P2I3 314 aaPredicted RBP9.21□□□□□ -0.94
USP49-204ENST00000423567 ZBTB49Q6ZSB9 765 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 COMMD2Q86X83 199 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 OR4M2Q8NGB6 313 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 Q8TCH9 128 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ITFG2Q969R8 447 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 EME1Q96AY2 570 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 FAHD2AQ96GK7 314 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 SIGLEC11Q96RL6 698 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 TTTY10Q9BZA0 68 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PATZ1Q9HBE1 687 aaKnown RBP9.21□□□□□ -0.94
USP49-204ENST00000423567 ADGRL4Q9HBW9 690 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 ABCB9Q9NP78 766 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 RNF7Q9UBF6 113 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.21□□□□□ -0.94
USP49-204ENST00000423567 GTF2A1LQ9UNN4 478 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 PPIAL4AQ9Y536 164 aa9.21□□□□□ -0.94
USP49-204ENST00000423567 SONP18583 2426 aaKnown RBP9.21□□□□□ -0.94
USP49-204ENST00000423567 CHD3Q12873 2000 aaKnown RBP9.21□□□□□ -0.94
USP49-204ENST00000423567 hCG_1807616A0A1W2PRN6 198 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 FAM20BO75063 409 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 PNPP00491 289 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 KRT8P05787 483 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 GRPP07492 148 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 RPS2P15880 293 aaKnown RBP9.2□□□□□ -0.94
USP49-204ENST00000423567 GATA3P23771 443 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 CPT2P23786 658 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 IL5RAQ01344 420 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 EGR3Q06889 387 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 SCGB2A2Q13296 93 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 OR8B8Q15620 311 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 KCNJ8Q15842 424 aa9.2□□□□□ -0.94
USP49-204ENST00000423567 ESCO2Q56NI9 601 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms