RNA–Protein interactions for RNA: ENST00000422704.6

SEMA4D-208, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-208ENST00000422704 CTLA4P16410 223 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 INSM1Q01101 510 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 CEACAM16Q2WEN9 425 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 ACTBL2Q562R1 376 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 C5orf46Q6UWT4 87 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 RTN4IP1Q8WWV3 396 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 ZNF707Q96C28 371 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 MFRPQ9BY79 579 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 LAT2Q9GZY6 243 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 UBE2ZQ9H832 354 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 OBP2AQ9NY56 170 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 R4GN57 208 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 TSC2P49815 1807 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 MEIKINA0A087WXM9 373 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 A0A0B4J2E0 115 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 A0A1B0GX12 115 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 OLFM2O95897 454 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 NRASP01111 189 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 H2AFB1P0C5Y9 115 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 CCL2P13500 99 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 SLC37A1P57057 533 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 KIAA0141Q14154 515 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 OR8B8Q15620 311 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 WIPI1Q5MNZ9 446 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 LAIR1Q6GTX8 287 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 TMEM71Q6P5X7 295 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 CLEC9AQ6UXN8 241 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 ACOT7LQ6ZUV0 252 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 BAP18Q8IXM2 172 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 FBXL14Q8N1E6 418 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 SLC38A9Q8NBW4 561 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 IFI44Q8TCB0 444 aa9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 ANKRD9Q96BM1 317 aaPredicted RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 RPUSD4Q96CM3 377 aaKnown RBP9.54□□□□□ -0.88
SEMA4D-208ENST00000422704 ZNHIT1O43257 154 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 MGST1P10620 155 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 NDUFB7P17568 137 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 GABRA4P48169 554 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 PIGPP57054 158 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 ZNF117Q03924 483 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 CATR1Q13166 79 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 AVPI1Q5T686 147 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 FAM122CQ6P4D5 195 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 GCNT2Q8N0V5 402 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 TP53I13Q8NBR0 393 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 SCCPDHQ8NBX0 429 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 OR13C8Q8NGS7 320 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 RFESDQ8TAC1 157 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 C22orf15Q8WYQ4 148 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 PTP4A1Q93096 173 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 INTS12Q96CB8 462 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 PHF7Q9BWX1 381 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 BARHL1Q9BZE3 327 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 NECAP2Q9NVZ3 263 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 USF3Q68DE3 2245 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 DHHO43323 396 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 RPL12P30050 165 aaKnown RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 MYBPHQ13203 477 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 ALKBH6Q3KRA9 238 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 OR2L13Q8N349 312 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 ZNF439Q8NDP4 499 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 VN1R1Q9GZP7 353 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 OSGIN2Q9Y236 505 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 LMO7DNF2Z398 122 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 TRAPPC2P0DI81 140 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 TRAPPC2BP0DI82 140 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 RAB4AP20338 218 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 MNX1P50219 401 aaPredicted RBP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 HMGA2P52926 109 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 TMPRSS11FQ6ZWK6 438 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 DPPA2Q7Z7J5 298 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 OR10J5Q8NHC4 309 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 FN3KRPQ9HA64 309 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 OR5V1Q9UGF6 321 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 PTPRQQ9UMZ3 2332 aa9.53□□□□□ -0.88
SEMA4D-208ENST00000422704 SONP18583 2426 aaKnown RBP9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 GRB2P62993 217 aaKnown RBP9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 HBG1P69891 147 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 HBG2P69892 147 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 GUSBP11Q6P575 273 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 TEX261Q6UWH6 196 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 MUC20Q8N307 709 aaPredicted RBP9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 RXFP4Q8TDU9 374 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 NKX6-2Q9C056 277 aaPredicted RBP9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 ZNF355PQ9NSJ1 428 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 C19orf12Q9NSK7 152 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 U3KQ87 197 aa9.52□□□□□ -0.88
SEMA4D-208ENST00000422704 COL4A4P53420 1690 aaPredicted RBP9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 A8MXE2 369 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 CD226Q15762 336 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 PLAC9Q5JTB6 97 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 HIST2H3AQ71DI3 136 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 ZNF687Q8N1G0 1237 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 OTOSQ8NHW6 89 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 MED30Q96HR3 178 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 REEP6Q96HR9 211 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 WFDC6Q9BQY6 131 aa9.52□□□□□ -0.89
SEMA4D-208ENST00000422704 R4GMQ9 66 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms