RNA–Protein interactions for RNA: ENST00000422245.5

SQSTM1-203, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-203ENST00000422245 OR8S1Q8NH09 359 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 RNF133Q8WVZ7 376 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 INTS14Q96SY0 518 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 PCGF1Q9BSM1 259 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 SLITRK2Q9H156 845 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 SMURF1Q9HCE7 757 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 VNN3Q9NY84 501 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 N6AMT1Q9Y5N5 214 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 MMP24Q9Y5R2 645 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 SOX21Q9Y651 276 aaPredicted RBP9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 U3KQV3 271 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 MEGF8Q7Z7M0 2845 aa9.59□□□□□ -0.87
SQSTM1-203ENST00000422245 PKD1L1Q8TDX9 2849 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 A0A1B0GUS0 222 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 hCG_38984A0A1B0GV85 526 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 ARRDC5A6NEK1 342 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 B2RBV5 119 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TNFRSF13BO14836 293 aaPredicted RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TIPRLO75663 272 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TOX4O94842 621 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 ECDO95905 644 aaPredicted RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 GRPP07492 148 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 SFTPBP07988 381 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 CLUP10909 449 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 MMP9P14780 707 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 HOXA4Q00056 320 aaPredicted RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 PPP1R8Q12972 351 aaKnown RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TRIM25Q14258 630 aaKnown RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 LINC01590Q5TEZ4 76 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TEX36Q5VZQ5 186 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF826PQ6ZT77 177 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 RHOUQ7L0Q8 258 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 SLC16A9Q7RTY1 509 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 DPY19L4Q7Z388 723 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 ERI1Q8IV48 349 aaKnown RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 FTMTQ8N4E7 242 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 GCSAMQ8N6F7 178 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 OR6N2Q8NGY6 317 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 GATAD2BQ8WXI9 593 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TMIGD2Q96BF3 282 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 REEP6Q96HR9 211 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM71F1Q96KD3 344 aaPredicted RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 TBX15Q96SF7 602 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 RGCCQ9H4X1 137 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 MARCH7Q9H992 704 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 RNPEPL1Q9HAU8 725 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 KAAG1Q9UBP8 84 aa9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 PRPF19Q9UMS4 504 aaKnown RBP9.58□□□□□ -0.88
SQSTM1-203ENST00000422245 H3BN98 237 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 WIPF1O43516 503 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 LHBP01229 141 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 GYPAP02724 150 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 RAP2AP10114 183 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 MUC1P15941 1255 aaPredicted RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 PAICSP22234 425 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 GSTT1P30711 240 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 GNALP38405 381 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 OPRL1P41146 370 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 GYS2P54840 703 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 ZNF121P58317 390 aaPredicted RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 RPL15P61313 204 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM3AP98173 230 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 PDCD1Q15116 288 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 MICBQ29980 383 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 RUSC1-AS1Q66K80 236 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 Q6YL49 198 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM57BQ71RH2 274 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 SHFQ7M4L6 423 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 PRSS45Q7RTY3 260 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 CSNK2A3Q8NEV1 391 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 OR4F5Q8NH21 305 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 LRRC29Q8WV35 223 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 SSMEM1Q8WWF3 244 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 C12orf43Q96C57 262 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 ASB9Q96DX5 294 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 LRGUKQ96M69 825 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 WDFY2Q96P53 400 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 NIPSNAP1Q9BPW8 284 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 ABHD6Q9BV23 337 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 PAPOLGQ9BWT3 736 aaKnown RBP9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 OR10A2Q9H208 303 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 ABCB9Q9NP78 766 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 POMT1Q9Y6A1 747 aa9.57□□□□□ -0.88
SQSTM1-203ENST00000422245 IGHV1-69DA0A0B4J2H0 117 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 CENPVL3A0A0U1RRI6 287 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM181BA6NEQ2 426 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 FAM183AA6NL82 134 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 ANXA2P2A6NMY6 339 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 DVL1O14640 695 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 GLCEO94923 617 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 NDUFA7O95182 113 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 IGHV1-69P01742 117 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 CRYBA1P05813 215 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 MELTFP08582 738 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 HOXB6P17509 224 aaKnown RBP9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 MDKP21741 143 aaPredicted RBP9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 CALB2P22676 271 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 NAA10P41227 235 aaPredicted RBP9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 GSK3AP49840 483 aa9.56□□□□□ -0.88
SQSTM1-203ENST00000422245 RAG2P55895 527 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms