RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BRD7Q9NPI1 651 aa12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 PLEKHB1Q9UF11 243 aaPredicted RBP12.32□□□□□ -0.44
SHMT1P1-201ENST00000419974 A0A0G2JK05 382 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 C5orf63A6NC05 138 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 SMPD2O60906 423 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 CLPXO76031 633 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 RAD52P43351 418 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 MAP2K3P46734 347 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 IDH3GP51553 393 aaPredicted RBP12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 UCP2P55851 309 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 ZNF92Q03936 586 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 TFF3Q07654 80 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 RIPPLY1Q0D2K3 151 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 GLYATL3Q5SZD4 288 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 FJX1Q86VR8 437 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 PAQR4Q8N4S7 273 aaPredicted RBP12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 SEMA6DQ8NFY4 1073 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 AP3S1Q92572 193 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 FOXRED1Q96CU9 486 aaPredicted RBP12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 DCUN1D5Q9BTE7 237 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 BARHL1Q9BZE3 327 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 PMF1-BGLAPU3KQ54 211 aa12.31□□□□□ -0.44
SHMT1P1-201ENST00000419974 TBX1O43435 398 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 ERCC1P07992 297 aaPredicted RBP12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 PTAFRP25105 342 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 SOX2P48431 317 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 NAAAQ02083 359 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 LSAMPQ13449 338 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 TNK1Q13470 666 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 ODF4Q2M2E3 257 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 MYPOPQ86VE0 399 aaPredicted RBP12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 NR2C2APQ86WQ0 139 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 ZNF101Q8IZC7 436 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 CSNK2A3Q8NEV1 391 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 PIGTQ969N2 578 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 FGGYQ96C11 551 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 ADAT3Q96EY9 351 aaPredicted RBP12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 CHST5Q9GZS9 411 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 CDH20Q9HBT6 801 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 NGBQ9NPG2 151 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 TMEM138Q9NPI0 162 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 KCNJ16Q9NPI9 418 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 STARD10Q9Y365 291 aa12.3□□□□□ -0.44
SHMT1P1-201ENST00000419974 TRAV8-7A0A075B6U6 113 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 IGHV2OR16-5A0A0B4J2B6 119 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 AIPO00170 330 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 CST4P01036 141 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 NGFP01138 241 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 CELA3BP08861 270 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 RAC2P15153 192 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 ADRA2CP18825 462 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 MAGEB1P43366 347 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 GSK3AP49840 483 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 SFXN4Q6P4A7 337 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 FTMTQ8N4E7 242 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 CA5BP1Q8WTZ4 195 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 SPSB1Q96BD6 273 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 CMTM3Q96MX0 182 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 UQCC2Q9BRT2 126 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 NPAP1Q9NZP6 1156 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 ABRACLQ9P1F3 81 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 V9GY05 133 aa12.29□□□□□ -0.44
SHMT1P1-201ENST00000419974 A0A1B0GWJ7 208 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 A0A1W2PR80 420 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 SULT1B1O43704 296 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 CRYAAP02489 173 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 THBDP07204 575 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 RNF224P0DH78 156 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 CCL2P13500 99 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 PRF1P14222 555 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 SELEP16581 610 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 ZNF20P17024 532 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 CCNOP22674 350 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 ACKR3P25106 362 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 CAPZA1P52907 286 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 PPP3R1P63098 170 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 MBNL2Q5VZF2 373 aaKnown RBP12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 FAM166AQ6J272 317 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 TMEM108Q6UXF1 575 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 RFPL4BQ6ZWI9 263 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 DNAAF1Q8NEP3 725 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 NUP37Q8NFH4 326 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 OR1M1Q8NGA1 313 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 HAVCR1Q96D42 359 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 FAM71F1Q96KD3 344 aaPredicted RBP12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 GFI1Q99684 422 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 SLC30A2Q9BRI3 323 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 SOX7Q9BT81 388 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 PLEKHA1Q9HB21 404 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 NEK6Q9HC98 313 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 ABCB9Q9NP78 766 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 SPEF1Q9Y4P9 236 aa12.28□□□□□ -0.44
SHMT1P1-201ENST00000419974 UNC79Q9P2D8 2635 aa12.27□□□□□ -0.44
SHMT1P1-201ENST00000419974 ZNF816-ZNF321PA0A0X1KG74 233 aa12.27□□□□□ -0.45
SHMT1P1-201ENST00000419974 A0A1W2PPK0 400 aa12.27□□□□□ -0.45
SHMT1P1-201ENST00000419974 CLEC2LP0C7M8 214 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms