RNA–Protein interactions for RNA: ENST00000418501.5

USP54-203, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,370 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-203ENST00000418501 GABRG1Q8N1C3 465 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 SPERTQ8NA61 448 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 RGP1Q92546 391 aaPredicted RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 PIGMQ9H3S5 423 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 FBLN5Q9UBX5 448 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 MPC1Q9Y5U8 109 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 ZNF736B4DX44 427 aaPredicted RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 SLC2A1P11166 492 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PRF1P14222 555 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 S100A1P23297 94 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 HLA-DMAP28067 261 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 HOXD11P31277 338 aaPredicted RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 TAS2R46P59540 309 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PCGF3Q3KNV8 242 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 RNASE12Q5GAN4 147 aaKnown RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 C1orf185Q5T7R7 199 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PLXDC2Q6UX71 529 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 NRARPQ7Z6K4 114 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 DUSP18Q8NEJ0 188 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 OR1K1Q8NGR3 316 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 HPS1Q92902 700 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 RAB3CQ96E17 227 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 SOSTQ9BQB4 213 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 SLC25A21Q9BQT8 299 aaPredicted RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 TP63Q9H3D4 680 aaPredicted RBP7.36□□□□□ -1.23
USP54-203ENST00000418501 SPACA1Q9HBV2 294 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 GPR160Q9UJ42 338 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 A0A1B0GTH9 108 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 AGTR1P30556 359 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 OPRM1P35372 400 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 CLDN12P56749 244 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PSG4Q00888 419 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 ZNF79Q15937 498 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 GDPD3Q7L5L3 318 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 ASCL5Q7RTU5 278 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 LIX1LQ8IVB5 337 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 OR5H6Q8NGV6 325 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 OR14K1Q8NGZ2 314 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 OR8S1Q8NH09 359 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 AKR7LQ8NHP1 331 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 NABP1Q96AH0 204 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 BCL2L14Q9BZR8 327 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PTTG3PQ9NZH4 202 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 V9GYS6 101 aa7.36□□□□□ -1.23
USP54-203ENST00000418501 PCNTO95613 3336 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 TRAV8-7A0A075B6U6 113 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 SYNGR3O43761 229 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 SRSF10O75494 262 aaKnown RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 PSMB1P20618 241 aaKnown RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 TAS2R31P59538 309 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 BAK1Q16611 211 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 ZSCAN4Q8NAM6 433 aaPredicted RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 PIGCQ92535 297 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 PAPOLGQ9BWT3 736 aaKnown RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 NLKQ9UBE8 527 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 C5orf49A4QMS7 147 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 SERPINE3A8MV23 424 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 CTAG2O75638 210 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RAD51DO75771 328 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RAB3DO95716 219 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 TMIGD3P0DMS9 266 aaPredicted RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 MAB21L1Q13394 359 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RBMS2Q15434 407 aaKnown RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 NSUN5P2Q63ZY6 315 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 Q6ZS92 163 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 BTN2A1Q7KYR7 527 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 ZNF573Q86YE8 665 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RTL8AQ9BWD3 113 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 CGGBP1Q9UFW8 167 aaPredicted RBP7.35□□□□□ -1.23
USP54-203ENST00000418501 TMEM272A0A1B0GTI8 110 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 OR5B21A6NL26 309 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 HTR3BO95264 441 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RLN1P04808 185 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 ZFP69Q49AA0 526 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 SKA3Q8IX90 412 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 ZDHHC23Q8IYP9 409 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 TMEM229BQ8NBD8 167 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 OR10R2Q8NGX6 335 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 SNAPC3Q92966 411 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 RHOFQ9HBH0 211 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 EDARQ9UNE0 448 aa7.35□□□□□ -1.23
USP54-203ENST00000418501 FAM230AA0A1W2PPH8 454 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 MEIOCA2RUB1 952 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 PRR32B1ATL7 298 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 TRAPPC2LH3BP13 241 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 H7C1Q1 480 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 CELA3AP09093 270 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 TSPAN5P62079 268 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 TBRG1Q3YBR2 411 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 Q6ZT83 130 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 SIAH3Q8IW03 269 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 SLC30A7Q8NEW0 376 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 SFXN3Q9BWM7 321 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 WNT5BQ9H1J7 359 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 AUNIPQ9H7T9 357 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 TUBD1Q9UJT1 453 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 POLDIP2Q9Y2S7 368 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 H7C417 338 aa7.34□□□□□ -1.23
USP54-203ENST00000418501 IGHV3-9P01782 118 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms