RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 ACKR3P25106 362 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 GIFP27352 417 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 RBMXP38159 391 aaKnown RBP10.57□□□□□ -0.72
SKA1-203ENST00000417656 PSMB10P40306 273 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 GSK3AP49840 483 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 MMP16P51512 607 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 RAB40BQ12829 278 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 RIN1Q13671 783 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 OR8B8Q15620 311 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 CDONQ4KMG0 1287 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 ACBD7Q8N6N7 88 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 OR51E1Q8TCB6 317 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 FAM71F1Q96KD3 344 aaPredicted RBP10.57□□□□□ -0.72
SKA1-203ENST00000417656 MEGF10Q96KG7 1140 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 SIGLEC11Q96RL6 698 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 ALG8Q9BVK2 526 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 G6PC2Q9NQR9 355 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 GPR84Q9NQS5 396 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 MRPL15Q9P015 296 aaKnown RBP10.57□□□□□ -0.72
SKA1-203ENST00000417656 OR52A1Q9UKL2 312 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 PCDHGB1Q9Y5G3 927 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 HSPE1-MOB4S4R3N1 261 aa10.57□□□□□ -0.72
SKA1-203ENST00000417656 ACANP16112 2415 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ZNF469Q96JG9 3925 aaPredicted RBP10.56□□□□□ -0.72
SKA1-203ENST00000417656 IGHV4-61A0A0C4DH41 118 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 A0A0U1RQV5 110 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ACOD1A6NK06 481 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ANKRD30BLA7E2S9 258 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 H0YJX3 145 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 FAM20BO75063 409 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 IGLV3-1P01715 115 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 CRYBB2P43320 205 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 GPR6P46095 362 aaPredicted RBP10.56□□□□□ -0.72
SKA1-203ENST00000417656 OR12D2P58182 307 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ACTA2P62736 377 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ACTG2P63267 376 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 OR8G1Q15617 311 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 WDR38Q5JTN6 314 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 AVPI1Q5T686 147 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 LAIR2Q6ISS4 152 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 LHFPL3Q86UP9 236 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 CATSPERDQ86XM0 798 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 LURAP1LQ8IV03 231 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 FBLIM1Q8WUP2 373 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 RORBQ92753 470 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 C4orf36Q96KX1 117 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 SMR3AQ99954 134 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 PAPOLGQ9BWT3 736 aaKnown RBP10.56□□□□□ -0.72
SKA1-203ENST00000417656 PPP1R3EQ9H7J1 279 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 MRPS18AQ9NVS2 196 aaKnown RBP10.56□□□□□ -0.72
SKA1-203ENST00000417656 ERVK13-1Q9NX77 482 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 DCAF16Q9NXF7 216 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 IL19Q9UHD0 177 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 ZNF391Q9UJN7 358 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 SLC22A13Q9Y226 551 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 SNX5Q9Y5X3 404 aa10.56□□□□□ -0.72
SKA1-203ENST00000417656 CLDN25C9JDP6 229 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 J3QLW9 94 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 P2RY10O00398 339 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 PPIHO43447 177 aaKnown RBP10.55□□□□□ -0.72
SKA1-203ENST00000417656 FOSL1P15407 271 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 ZNF19P17023 458 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 TNFRSF1AP19438 455 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 USF1P22415 310 aaPredicted RBP10.55□□□□□ -0.72
SKA1-203ENST00000417656 DDOSTP39656 456 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 KIR3DL2P43630 455 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 SRP9P49458 86 aaKnown RBP10.55□□□□□ -0.72
SKA1-203ENST00000417656 GALEQ14376 348 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 ODF4Q2M2E3 257 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 HFEQ30201 348 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 KLHL22Q53GT1 634 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 PRAMEF6Q5VXH4 476 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 THAP5Q7Z6K1 395 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 ELMOD2Q8IZ81 293 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 CSNK2A3Q8NEV1 391 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 CCL17Q92583 94 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 SLC22A4Q9H015 551 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 NARFLQ9H6Q4 476 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 FGF20Q9NP95 211 aaPredicted RBP10.55□□□□□ -0.72
SKA1-203ENST00000417656 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 NOP16Q9Y3C1 178 aaKnown RBP10.55□□□□□ -0.72
SKA1-203ENST00000417656 RHBDD3Q9Y3P4 386 aa10.55□□□□□ -0.72
SKA1-203ENST00000417656 DYSFO75923 2080 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 IRGMA1A4Y4 181 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 LRP5LA4QPB2 252 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 H3BSH0 61 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 XPNPEP2O43895 674 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 LIMS3P0CW19 117 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 LIMS4P0CW20 117 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 GNALP38405 381 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 CD200P41217 278 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 MVKQ03426 396 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 LOXL1Q08397 574 aaPredicted RBP10.54□□□□□ -0.72
SKA1-203ENST00000417656 MAB21L1Q13394 359 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 MOGAT3Q86VF5 341 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 SYS1Q8N2H4 156 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 PRSS35Q8N3Z0 413 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 ZNF540Q8NDQ6 660 aa10.54□□□□□ -0.72
SKA1-203ENST00000417656 ZNF420Q8TAQ5 688 aaPredicted RBP10.54□□□□□ -0.72
SKA1-203ENST00000417656 PELI1Q96FA3 418 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms