RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 DYRK2Q92630 601 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 SPSB4Q96A44 273 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 CCT8L2Q96SF2 557 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 BTBD10Q9BSF8 475 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 LYVE1Q9Y5Y7 322 aa12.23□□□□□ -0.45
RPS28-201ENST00000417088 PRKDCP78527 4128 aaKnown RBP12.23□□□□□ -0.45
RPS28-201ENST00000417088 A0A1B0GW55 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 ZNF593O00488 134 aaPredicted RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 XRCC2O43543 280 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 KRT36O76013 467 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 GASTP01350 101 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 GYPBP06028 91 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L2P0CJ85 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L3P0CJ86 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L4P0CJ87 422 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L5P0CJ88 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L6P0CJ89 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L7P0CJ90 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 FMO3P31513 532 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DDOSTP39656 456 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 IER3P46695 156 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 ELF3P78545 371 aaPredicted RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 CRMP1Q14194 572 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 TAF13Q15543 124 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 TEX30Q5JUR7 227 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 SAMD4BQ5PRF9 694 aaKnown RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 ZNF770Q6IQ21 691 aaPredicted RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4L9Q6RFH8 374 aaPredicted RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 RASSF6Q6ZTQ3 369 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 PDZD9Q8IXQ8 264 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 PGAM4Q8N0Y7 254 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 PIP4P2Q8N4L2 257 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 SCCPDHQ8NBX0 429 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 LINC01006Q8NI28 216 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 ST8SIA4Q92187 359 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 CDRT15Q96T59 188 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 NMNAT2Q9BZQ4 307 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 CNTD2Q9H8S5 307 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 RNPEPL1Q9HAU8 725 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DUX4Q9UBX2 424 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 RPUSD1Q9UJJ7 312 aaKnown RBP12.22□□□□□ -0.45
RPS28-201ENST00000417088 RNF114Q9Y508 228 aa12.22□□□□□ -0.45
RPS28-201ENST00000417088 DHRS12A0PJE2 317 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 ANKRD30BLA7E2S9 258 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 ZNF878C9JN71 531 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 M0QZ24 198 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 TNFRSF11BO00300 401 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 CLUP10909 449 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 PROK1P58294 105 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 FAM3AP98173 230 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 CDONQ4KMG0 1287 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 ASPHD2Q6ICH7 369 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 SLC16A9Q7RTY1 509 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 VMO1Q7Z5L0 202 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 LY6G5BQ8NDX9 201 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 OR4Q3Q8NH05 313 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 OR8S1Q8NH09 359 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 LRRC29Q8WV35 223 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 SGK3Q96BR1 496 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 CCL13Q99616 98 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 TSSK6Q9BXA6 273 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 PPP1R3EQ9H7J1 279 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 MED4Q9NPJ6 270 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 KPTNQ9Y664 436 aa12.21□□□□□ -0.45
RPS28-201ENST00000417088 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.2□□□□□ -0.46
RPS28-201ENST00000417088 TIMM23O14925 209 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 TBX1O43435 398 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 CLPXO76031 633 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 MUC1P15941 1255 aaPredicted RBP12.2□□□□□ -0.46
RPS28-201ENST00000417088 SPI1P17947 270 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 GRK5P34947 590 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 CX3CR1P49238 355 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 SLC25A1P53007 311 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 CSNK2BP67870 215 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 MICBQ29980 383 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 WDR38Q5JTN6 314 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 PRSS45Q7RTY3 260 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 DPY19L4Q7Z388 723 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 LINC00471Q8N535 108 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 OR1M1Q8NGA1 313 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 SEH1LQ96EE3 360 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 RBM4BQ9BQ04 359 aaKnown RBP12.2□□□□□ -0.46
RPS28-201ENST00000417088 MMP27Q9H306 513 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 TBC1D23Q9NUY8 699 aa12.2□□□□□ -0.46
RPS28-201ENST00000417088 hCG_38984A0A1B0GV85 526 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 A0A1B0GVI7 797 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 SNX3O60493 162 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 CCNB2O95067 398 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 ANXA2P07355 339 aaKnown RBP12.19□□□□□ -0.46
RPS28-201ENST00000417088 AMY2BP19961 511 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 SLC15A1P46059 708 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 GRB2P62993 217 aaKnown RBP12.19□□□□□ -0.46
RPS28-201ENST00000417088 PPP1R8Q12972 351 aaKnown RBP12.19□□□□□ -0.46
RPS28-201ENST00000417088 EIF2B1Q14232 305 aaKnown RBP12.19□□□□□ -0.46
RPS28-201ENST00000417088 KLHL12Q53G59 568 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 LINC01590Q5TEZ4 76 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 WDR82Q6UXN9 313 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 FAM216BQ8N7L0 139 aa12.19□□□□□ -0.46
RPS28-201ENST00000417088 ZSCAN4Q8NAM6 433 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms