RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 GSTT1P30711 240 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 GRB2P62993 217 aaKnown RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 CSNK2BP67870 215 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 TAF13Q15543 124 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 PLBD1Q6P4A8 553 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4L9Q6RFH8 374 aaPredicted RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FAM57BQ71RH2 274 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FAM90A1Q86YD7 464 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 AQP12AQ8IXF9 295 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 OR11L1Q8NGX0 322 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 GCDHQ92947 438 aaPredicted RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 OTULINQ96BN8 352 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 SGK3Q96BR1 496 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 REEP6Q96HR9 211 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FGF23Q9GZV9 251 aaPredicted RBP12.55□□□□□ -0.4
UBXN4-203ENST00000416538 SLC22A4Q9H015 551 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FN3KRPQ9HA64 309 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 C1orf123Q9NWV4 160 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 FAM53CQ9NYF3 392 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 DUX4Q9UBX2 424 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 CLN8Q9UBY8 286 aa12.55□□□□□ -0.4
UBXN4-203ENST00000416538 IGHV3OR15-7A0A075B7D8 119 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 PRR32B1ATL7 298 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 DYNC1I1O14576 645 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 GMDSO60547 372 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 GRPP07492 148 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 PPIAL4GP0DN37 164 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 SLC2A5P22732 501 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 POU1F1P28069 291 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 NAA10P41227 235 aaPredicted RBP12.54□□□□□ -0.4
UBXN4-203ENST00000416538 FGF12P61328 243 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 POU4F2Q12837 409 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 GK3PQ14409 553 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 GINS1Q14691 196 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 TMEM236Q5W0B7 351 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 LRRN1Q6UXK5 716 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 BRD3OSQ6XYD6 125 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 C9orf139Q6ZV77 190 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 NLRC3Q7RTR2 1065 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 SEH1LQ96EE3 360 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 PLEKHA8Q96JA3 519 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 OR51V1Q9H2C8 321 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 MMADHCQ9H3L0 296 aaPredicted RBP12.54□□□□□ -0.4
UBXN4-203ENST00000416538 NTN4Q9HB63 628 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 BRD7Q9NPI1 651 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 MGAM2Q2M2H8 2515 aa12.54□□□□□ -0.4
UBXN4-203ENST00000416538 TCRBV3S1A0A5B6 114 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 OOEPA6NGQ2 149 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 A6NLC8 198 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 FKBP6O75344 327 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 GYPAP02724 150 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 SFTPBP07988 381 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 CPT2P23786 658 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 PRTN3P24158 256 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 ACKR3P25106 362 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 BLVRAP53004 296 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 CDK5Q00535 292 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 FLOT2Q14254 428 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 TIGD6Q17RP2 521 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 GFOD2Q3B7J2 385 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 RUSC1-AS1Q66K80 236 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 BTNL3Q6UXE8 466 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 OTOSQ8NHW6 89 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 LYZL4Q96KX0 146 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 TBX15Q96SF7 602 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 RASSF4Q9H2L5 321 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 TOR3AQ9H497 397 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 OPA3Q9H6K4 179 aa12.53□□□□□ -0.4
UBXN4-203ENST00000416538 CCDC182A6NF36 153 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 ADAM20O43506 726 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 LHBP01229 141 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 HKR1P10072 659 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 OSMP13725 252 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 MMP9P14780 707 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 HSD11B1P28845 292 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 SLC15A1P46059 708 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 GSK3AP49840 483 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 CBX1P83916 185 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 SLC9A3R2Q15599 337 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 OR8B8Q15620 311 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 WDR82Q6UXN9 313 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 CPOQ8IVL8 374 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 PLPP7Q8NBV4 271 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 PAPD5Q8NDF8 572 aaKnown RBP12.52□□□□□ -0.41
UBXN4-203ENST00000416538 ITPKCQ96DU7 683 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 TECTBQ96PL2 329 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
UBXN4-203ENST00000416538 SLC25A19Q9HC21 320 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 POMPQ9Y244 141 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 NOP16Q9Y3C1 178 aaKnown RBP12.52□□□□□ -0.41
UBXN4-203ENST00000416538 RHBDD3Q9Y3P4 386 aa12.52□□□□□ -0.41
UBXN4-203ENST00000416538 hCG_1807616A0A1W2PRN6 198 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 PRR23D1E9PI22 279 aaPredicted RBP12.51□□□□□ -0.41
UBXN4-203ENST00000416538 M0R129 80 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 ENSAO43768 121 aaKnown RBP12.51□□□□□ -0.41
UBXN4-203ENST00000416538 E2F6O75461 281 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 LYNP07948 512 aa12.51□□□□□ -0.41
UBXN4-203ENST00000416538 RNASE1P07998 156 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms