RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TBX5Q99593 518 aa15.21■□□□□ 0.03
SEMA3B-201ENST00000416295 NPTNQ9Y639 398 aa15.21■□□□□ 0.03
SEMA3B-201ENST00000416295 LRRC30A6NM36 301 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 A8MV72 311 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 LOC110117498-PIK3R3F6TDL0 507 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 CASQ2O14958 399 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 GABRB1P18505 474 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 IL2RGP31785 369 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 ELF3P78545 371 aaPredicted RBP15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF181Q2M3W8 571 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 FAM166AQ6J272 317 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 PLPP7Q8NBV4 271 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 RHOXF1Q8NHV9 184 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 RAB39BQ96DA2 213 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 C1orf159Q96HA4 380 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 PBOV1Q9GZY1 135 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 NUFIP1Q9UHK0 495 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 MRM2Q9UI43 246 aaKnown RBP15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 PCDHGB1Q9Y5G3 927 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 R4GMQ9 66 aa15.2■□□□□ 0.02
SEMA3B-201ENST00000416295 LOC100289279A0A1B0GTE1 492 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 ISPDA4D126 451 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 INAFM1C9JVW0 142 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 TMEM178BH3BS89 294 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 DLGAP1O14490 977 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 WNT9BO14905 357 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 SULT1C4O75897 302 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 GNALP38405 381 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 MAB21L1Q13394 359 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 BCL2L15Q5TBC7 163 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 PLEKHG7Q6ZR37 379 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 SSX6Q7RTT6 188 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 MOGAT3Q86VF5 341 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 COMMD2Q86X83 199 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 C1orf87Q8N0U7 546 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 YIPF7Q8N8F6 280 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 LINC01356Q8N9X3 169 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 OR8S1Q8NH09 359 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 GAL3ST1Q99999 423 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 VCXQ9H320 206 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 ABCB9Q9NP78 766 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 C14orf119Q9NWQ9 140 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 DCAF16Q9NXF7 216 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 GTF2A1LQ9UNN4 478 aa15.19■□□□□ 0.02
SEMA3B-201ENST00000416295 TANC2Q9HCD6 1990 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 METTL15A6NJ78 407 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 B4DSR2 109 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 MAGEB4O15481 346 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 SRSF10O75494 262 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 PTBP3O95758 552 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 IGHV2-70P01814 119 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 IRF2P14316 349 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 ATP6V1B1P15313 513 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 CDH15P55291 814 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 BTG1P62324 171 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF91Q05481 1191 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 MFGE8Q08431 387 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 OGFRL1Q5TC84 451 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 TTC23Q5W5X9 447 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 FAM220AQ7Z4H9 259 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 OR11L1Q8NGX0 322 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 Q8TCH9 128 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 LYZL4Q96KX0 146 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 SIGLEC11Q96RL6 698 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 MYCBPQ99417 103 aaPredicted RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 SOX7Q9BT81 388 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 PAPOLGQ9BWT3 736 aaKnown RBP15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 FN3KRPQ9HA64 309 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 KCNS2Q9ULS6 477 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 SNX5Q9Y5X3 404 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 ABCA1O95477 2261 aa15.18■□□□□ 0.02
SEMA3B-201ENST00000416295 IGHV3-64DA0A0J9YX35 117 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 ANXA2P2A6NMY6 339 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 PNPP00491 289 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 TGFAP01135 160 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 DBTP11182 482 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 MAP2K3P46734 347 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 LMO4P61968 165 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 IL5RAQ01344 420 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF684Q5T5D7 378 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 LIPNQ5VXI9 398 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 DHRSXQ8N5I4 330 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 SPICQ8N5J4 248 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 ACBD7Q8N6N7 88 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF420Q8TAQ5 688 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 OR51E1Q8TCB6 317 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 CYGBQ8WWM9 190 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 DVL3Q92997 716 aaPredicted RBP15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 MRPL48Q96GC5 212 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 ZNF665Q9H7R5 613 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 GPR84Q9NQS5 396 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 TMEM160Q9NX00 188 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 AASSQ9UDR5 926 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 OR52A1Q9UKL2 312 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 EXOGQ9Y2C4 368 aaKnown RBP15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 RHBDD3Q9Y3P4 386 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 MPC1Q9Y5U8 109 aa15.17■□□□□ 0.02
SEMA3B-201ENST00000416295 DAPL1A0PJW8 107 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 J3QRE1 110 aa15.16■□□□□ 0.02
SEMA3B-201ENST00000416295 LMX1BO60663 402 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 1609.4 ms