RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 FGFRL1Q8N441 504 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 ZNF611Q8N823 705 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 BOLLQ8N9W6 283 aaKnown RBP4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 ST6GALNAC3Q8NDV1 305 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR11H1Q8NG94 326 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR5L2Q8NGL0 311 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR5L1Q8NGL2 311 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR5M3Q8NGP4 307 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR4Q3Q8NH05 313 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR11H2Q8NH07 326 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR52E5Q8NH55 327 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 FAM110BQ8TC76 370 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 C16orf78Q8WTQ4 265 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 PSMF1Q92530 271 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 FAM168AQ92567 244 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 MBD6Q96DN6 1003 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 MS4A6EQ96DS6 147 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 POM121L2Q96KW2 1035 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 AMDHD1Q96NU7 426 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 IL4I1Q96RQ9 567 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 SDHCQ99643 169 aaPredicted RBP4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 NDUFAF3Q9BU61 184 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 HDHD5Q9BXW7 423 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 ALOXE3Q9BYJ1 711 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 OR8D2Q9GZM6 311 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 TLNRD1Q9H1K6 362 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 MMP28Q9H239 520 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 SYT4Q9H2B2 425 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 CDC42EP4Q9H3Q1 356 aaKnown RBP4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 TMBIM4Q9HC24 238 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 MSL2Q9HCI7 577 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 DNAJC4Q9NNZ3 241 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 TMEM138Q9NPI0 162 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 POLE4Q9NR33 117 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 ACOXLQ9NUZ1 547 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 MRTO4Q9UKD2 239 aaKnown RBP4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 IKZF2Q9UKS7 526 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 COPS3Q9UNS2 423 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 CDH10Q9Y6N8 788 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 USP9YO00507 2555 aaPredicted RBP4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 CENPEQ02224 2701 aa4.22□□□□□ -1.73
GTF3C2-203ENST00000415683 SPTAN1Q13813 2472 aaKnown RBP4.21□□□□□ -1.73
GTF3C2-203ENST00000415683 RP1L1Q8IWN7 2480 aaPredicted RBP4.21□□□□□ -1.73
GTF3C2-203ENST00000415683 NPIPA5A0A0B4J1W7 369 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 PPIAL4CA0A0B4J2A2 164 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 C1orf226A1L170 272 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 PSMB11A5LHX3 300 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 LRRC3CA6NJW4 275 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 A6NNC1 897 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 C17orf105B2RV13 164 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 NPIPA5E9PKD4 350 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 NPIPA3F8WFD2 350 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 TSTD3H0UI37 97 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 CXCR6O00574 342 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 BHLHE40O14503 412 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 PPP1R2P9O14990 202 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 CHST1O43916 411 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 CDC40O60508 579 aaKnown RBP eCLIP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 LDB3O75112 727 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SULT1C4O75897 302 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SUPT7LO94864 414 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 TNFAIP8O95379 198 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 TSPAN13O95857 204 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 GAPDHP04406 335 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SP1P08047 785 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 PPIAL4GP0DN37 164 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 GP1BBP13224 206 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ABOP16442 354 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ZNF23P17027 643 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 EFNA1P20827 205 aaPredicted RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 TBXA2RP21731 343 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 HIST1H1TP22492 207 aaPredicted RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ATP5A1P25705 553 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 GNRHRP30968 328 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 OR3A3P47888 321 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 CSNK1A1P48729 337 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 HLCSP50747 726 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SSR4P51571 173 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 UBE2KP61086 200 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 RPS13P62277 151 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 KCNJ2P63252 427 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SLC25A3Q00325 362 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 PLGLB1Q02325 96 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 NHLH2Q02577 135 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ELAVL1Q15717 326 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ZSWIM7Q19AV6 140 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 CTU2Q2VPK5 515 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 RFX4Q33E94 735 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 TIGD2Q4W5G0 525 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SAMD4BQ5PRF9 694 aaKnown RBP4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 FBXW9Q5XUX1 488 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 STUMQ69YW2 141 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 GRHL2Q6ISB3 625 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ZNF529Q6P280 563 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 SH2D5Q6ZV89 423 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 GOLGA7Q7Z5G4 137 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 APRG1Q8IVJ8 170 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 LGI3Q8N145 548 aa4.21□□□□□ -1.74
GTF3C2-203ENST00000415683 ACOT4Q8N9L9 421 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms