RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ACTG2P63267 376 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 LIPNQ5VXI9 398 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 OR7E24Q6IFN5 339 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF627Q7L945 461 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 OVCH2Q7RTZ1 564 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF454Q8N9F8 522 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 OR2AJ1Q8NGZ0 328 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 ACOT12Q8WYK0 555 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 SLAMF6Q96DU3 332 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 LINC00052Q96N35 136 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 OR8B4Q96RC9 309 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 MNTQ99583 582 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 VKORC1Q9BQB6 163 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 DPAGT1Q9H3H5 408 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 C1orf198Q9H425 327 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 ELOVL3Q9HB03 270 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 CENPMQ9NSP4 180 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 BABAM2Q9NXR7 383 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 SLC5A6Q9Y289 635 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 CACNG2Q9Y698 323 aa13.56□□□□□ -0.24
SHMT2-202ENST00000414700 FLNCQ14315 2725 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 PCP4L1A6NKN8 68 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 PAHP00439 452 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 CFDP00746 253 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-202ENST00000414700 HLA-HP01893 362 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 MT-ND5P03915 603 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF32P17041 273 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 BTCP35070 178 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 EGR3Q06889 387 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 IGFBP7Q16270 282 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 EIF2S3LQ2VIR3 472 aaKnown RBP13.55□□□□□ -0.24
SHMT2-202ENST00000414700 CLVS2Q5SYC1 327 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF474Q6S9Z5 364 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-202ENST00000414700 SLC16A14Q7RTX9 510 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 SYS1Q8N2H4 156 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 OR6M1Q8NGM8 313 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 OR1K1Q8NGR3 316 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 RNF133Q8WVZ7 376 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 DACT3Q96B18 629 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-202ENST00000414700 SFXN3Q9BWM7 321 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 REG4Q9BYZ8 158 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 ABCG5Q9H222 651 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 NUDT15Q9NV35 164 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 EXTL2Q9UBQ6 330 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 SCP2D1Q9UJQ7 156 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 LRP12Q9Y561 859 aa13.55□□□□□ -0.24
SHMT2-202ENST00000414700 TRAV6A0A075B6T7 132 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 MFSD2BA6NFX1 497 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 M0R233 179 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 NCR1O76036 304 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CST2P09228 141 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CD8BP10966 210 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CXCL3P19876 107 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 UQCRFS1P47985 274 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ROM1Q03395 351 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 TLE1Q04724 770 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 HACD4Q5VWC8 232 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ABHD12BQ7Z5M8 362 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 KRT77Q7Z794 578 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF679Q8IYX0 411 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 THAP7Q9BT49 309 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 NOX3Q9HBY0 568 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 IFT46Q9NQC8 304 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 MED9Q9NWA0 146 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 SDHAF2Q9NX18 166 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 SPTBN1Q01082 2364 aaKnown RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 A0A1W2PR80 420 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 PHYHO14832 338 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 MMP7P09237 267 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 SULT1A3P0DMM9 295 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 SULT1A4P0DMN0 295 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ELK1P19419 428 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CELP19835 753 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 COX5AP20674 150 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ANOS1P23352 680 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CBX5P45973 191 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 NANOS3P60323 173 aaKnown RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ZMYND11Q15326 602 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 KCTD18Q6PI47 426 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 FJX1Q86VR8 437 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 CXorf67Q86X51 503 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF433Q8N7K0 673 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 RELL2Q8NC24 303 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 ASB17Q8WXJ9 295 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 BCL2L2Q92843 193 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-202ENST00000414700 DLL4Q9NR61 685 aa13.54□□□□□ -0.24
SHMT2-202ENST00000414700 EEF1E1-BLOC1S5C9J1V9 151 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 KRBOX1C9JBD0 128 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 CCL21O00585 134 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 EEF1E1O43324 174 aaKnown RBP13.53□□□□□ -0.24
SHMT2-202ENST00000414700 FARS2O95363 451 aaKnown RBP13.53□□□□□ -0.24
SHMT2-202ENST00000414700 CNOT4O95628 575 aaKnown RBP13.53□□□□□ -0.24
SHMT2-202ENST00000414700 PNPP00491 289 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 CASP6P55212 293 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 HIST1H3AP68431 136 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 PSG4Q00888 419 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 NRN1LQ496H8 165 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 HIST2H3PS2Q5TEC6 136 aa13.53□□□□□ -0.24
SHMT2-202ENST00000414700 ZNF774Q6NX45 483 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms