RNA–Protein interactions for RNA: ENST00000413582.6

RFFL-203, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene RFFL, Length 1,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-203ENST00000413582 NIPSNAP1Q9BPW8 284 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 ADI1Q9BV57 179 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 SIRPDQ9H106 197 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 EMC7Q9NPA0 242 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 POLE4Q9NR33 117 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 FAM118AQ9NWS6 357 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 IL20Q9NYY1 176 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 HSPE1-MOB4S4R3N1 261 aa7.9□□□□□ -1.14
RFFL-203ENST00000413582 COL7A1Q02388 2944 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 A0A1B0GWJ7 208 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 LRRC30A6NM36 301 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 J3QW42 95 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 CDC42EP2O14613 210 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 SGCEO43556 437 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 GATA4P43694 442 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 GPR4P46093 362 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 NPY4RP50391 375 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 CRISP1P54107 249 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 RPL27P61353 136 aaKnown RBP7.89□□□□□ -1.15
RFFL-203ENST00000413582 HOXA4Q00056 320 aaPredicted RBP7.89□□□□□ -1.15
RFFL-203ENST00000413582 MED21Q13503 144 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 LAPTM4AQ15012 233 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 ALG10Q5BKT4 473 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 OR2T2Q6IF00 324 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 C19orf18Q8NEA5 215 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 OR13G1Q8NGZ3 307 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 FNDC8Q8TC99 324 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 Q8TCH9 128 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 PTP4A1Q93096 173 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 LHX4Q969G2 390 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 FAM46AQ96IP4 442 aaKnown RBP7.89□□□□□ -1.15
RFFL-203ENST00000413582 HRASLS5Q96KN8 279 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 TECTBQ96PL2 329 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 RBP7Q96R05 134 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 PITX2Q99697 317 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 WACQ9BTA9 647 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 ANKRD60Q9BZ19 345 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 NDEL1Q9GZM8 345 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 DPAGT1Q9H3H5 408 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 TOR3AQ9H497 397 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 SMURF1Q9HCE7 757 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.89□□□□□ -1.15
RFFL-203ENST00000413582 PTTG3PQ9NZH4 202 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 VPREB3Q9UKI3 123 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 HIF3AQ9Y2N7 669 aa7.89□□□□□ -1.15
RFFL-203ENST00000413582 TRAV27A0A087WT01 109 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 ZNF816-ZNF321PA0A0X1KG74 233 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 LOC100130705A0A1B0GUX0 176 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 OR6C6A6NF89 314 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 UNC119BA6NIH7 251 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 ZAR1LA6NP61 321 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 IQCF6A8MYZ5 107 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 EFCAB9A8MZ26 197 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 H7C1C5 153 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 PTP4A3O75365 173 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 LIPFP07098 398 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 GUCA1AP43080 201 aaPredicted RBP7.88□□□□□ -1.15
RFFL-203ENST00000413582 LOXL3P58215 753 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 LCN6P62502 163 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 CDK5Q00535 292 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 DBPQ10586 325 aaPredicted RBP7.88□□□□□ -1.15
RFFL-203ENST00000413582 ZBED5Q49AG3 693 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 CLEC12AQ5QGZ9 265 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 METTL11BQ5VVY1 283 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 OAFQ86UD1 273 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 IGFN1Q86VF2 1251 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 LRRC75AQ8NAA5 344 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 SCCPDHQ8NBX0 429 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 BHLHE23Q8NDY6 225 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 SETD9Q8NE22 299 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 OR13C2Q8NGS9 318 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 TRUB1Q8WWH5 349 aaKnown RBP7.88□□□□□ -1.15
RFFL-203ENST00000413582 PPP1R14AQ96A00 147 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 RASD2Q96D21 266 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 MBOAT4Q96T53 435 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 TEX12Q9BXU0 123 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 PRRG3Q9BZD7 231 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 SLC25A19Q9HC21 320 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 ZNRD1Q9P1U0 126 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 BAIAP2Q9UQB8 552 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 SIGLEC7Q9Y286 467 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 CDH10Q9Y6N8 788 aa7.88□□□□□ -1.15
RFFL-203ENST00000413582 MPZL2O60487 215 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 FAM20BO75063 409 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 FCN3O75636 299 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 HLA-DPB1P04440 258 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 HMGN1P05114 100 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 DBHP09172 617 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 IRF2P14316 349 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 MYF6P23409 242 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 RGS6P49758 472 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 FXYD6P3P58550 94 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 TAGLNQ01995 201 aaKnown RBP7.87□□□□□ -1.15
RFFL-203ENST00000413582 MAB21L1Q13394 359 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 AQP6Q13520 282 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 HERPUD1Q15011 391 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 PTGES3Q15185 160 aaKnown RBP7.87□□□□□ -1.15
RFFL-203ENST00000413582 ZIK1Q3SY52 487 aaPredicted RBP7.87□□□□□ -1.15
RFFL-203ENST00000413582 VAX1Q5SQQ9 334 aa7.87□□□□□ -1.15
RFFL-203ENST00000413582 SLX4IPQ5VYV7 408 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms