RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 TAAR3PQ9P1P4 343 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 PURGQ9UJV8 347 aaKnown RBP12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 LAMP3Q9UQV4 416 aa12.07□□□□□ -0.48
CHRNA1-204ENST00000409323 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 IGHV3-64DA0A0J9YX35 117 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 A0A0U1RQV5 110 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 A0A1W2PPK0 400 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 ANKRD61A6NGH8 418 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 ACOD1A6NK06 481 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 TMEM212A6NML5 194 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 CD300LBA8K4G0 201 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 IGLV3-1P01715 115 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 HLA-DPB1P04440 258 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 NAT2P11245 290 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 ZNF250P15622 560 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 CCR9P51686 369 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 TMBIM6P55061 237 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 TAS2R43P59537 309 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 MLLT11Q13015 90 aaPredicted RBP12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 MBNL2Q5VZF2 373 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 ZNF544Q6NX49 715 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 PHC2Q8IXK0 858 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 RPS4Y2Q8TD47 263 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 TSEN15Q8WW01 171 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 SPSB4Q96A44 273 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 HAVCR1Q96D42 359 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 PIGLQ9Y2B2 252 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 HECTD1Q9ULT8 2610 aa12.06□□□□□ -0.48
CHRNA1-204ENST00000409323 H0YL77 283 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 J3QW42 95 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 PLPP2O43688 288 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 UBCP0CG48 685 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 RAC2P15153 192 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 ACSM1Q08AH1 577 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 NKPD1Q17RQ9 610 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 MST1LQ2TV78 715 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 CNPY1Q3B7I2 92 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 ANKRD13BQ86YJ7 626 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 OR13C3Q8NGS6 347 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 OR14K1Q8NGZ2 314 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 BCL7BQ9BQE9 202 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 TPK1Q9H3S4 243 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 RSL24D1Q9UHA3 163 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 RHBDD3Q9Y3P4 386 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 FBN2P35556 2912 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 DHRS3O75911 302 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 CD8AP01732 235 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 CPEP16870 476 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 CA6P23280 308 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 RPS11P62280 158 aaKnown RBP eCLIP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 BDH1Q02338 343 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 FAM27D1Q5T7N8 215 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 TMEM244Q5VVB8 128 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 Q6ZR03 302 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 DOK3Q7L591 496 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 SEMA6DQ8NFY4 1073 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 OR10AD1Q8NGE0 317 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 PIGCQ92535 297 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 FGGYQ96C11 551 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 YIPF6Q96EC8 236 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 ADAT3Q96EY9 351 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 C14orf79Q96F83 325 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 OR14A2Q96R54 314 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 PAPOLGQ9BWT3 736 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 GPR160Q9UJ42 338 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 HHLA2Q9UM44 414 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 ZNF281Q9Y2X9 895 aa12.05□□□□□ -0.48
CHRNA1-204ENST00000409323 CELSR2Q9HCU4 2923 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 IGLV3-9A0A075B6K5 115 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 ZSCAN5BA6NJL1 495 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 SPRY3O43610 288 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 IGHV3-13P01766 116 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 ACHEP22303 614 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 CDKN1AP38936 164 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 TPBGQ13641 420 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 OR8B8Q15620 311 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 CEP78Q5JTW2 689 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 NPRL2Q8WTW4 380 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 ISOC1Q96CN7 298 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 RGCCQ9H4X1 137 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 PLEKHA1Q9HB21 404 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 GPR173Q9NS66 373 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 V9GYS6 101 aa12.04□□□□□ -0.48
CHRNA1-204ENST00000409323 USF3Q68DE3 2245 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 ZNF850A8MQ14 1090 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 ISG15P05161 165 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 DANCRP0C864 163 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 OCM2P0CE71 109 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 SELEP16581 610 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 KITLGP21583 273 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 CCL1P22362 96 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 SSTR2P30874 369 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 MAP2K3P46734 347 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 MMP15P51511 669 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 SELENOVP59797 346 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 SPRNQ5BIV9 151 aa12.03□□□□□ -0.48
CHRNA1-204ENST00000409323 EGFL6Q8IUX8 553 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms