RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 ACSM1Q08AH1 577 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 SAMD4BQ5PRF9 694 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 PRAMEF8Q5VWM4 474 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 PRAMEF7Q5VXH5 474 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 MEDAGQ5VYS4 303 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 REEP3Q6NUK4 255 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 AAED1Q7RTV5 226 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 ZNF383Q8NA42 475 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 UXS1Q8NBZ7 420 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 TRMT10AQ8TBZ6 339 aaKnown RBP8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 TMEM45BQ96B21 275 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 MUCL1Q96DR8 90 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 WDFY2Q96P53 400 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 ALKBH3Q96Q83 286 aaPredicted RBP8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 SLC38A2Q96QD8 506 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 AMBRA1Q9C0C7 1298 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 MMP28Q9H239 520 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 MUC13Q9H3R2 512 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 CCNB1IP1Q9NPC3 277 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 NGBQ9NPG2 151 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 B3GAT1Q9P2W7 334 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 UPB1Q9UBR1 384 aa8.43□□□□□ -1.06
NIF3L1-202ENST00000409020 HIVEP2P31629 2446 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 PLSCR5A0PG75 271 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 M0R3H8 397 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 SURF4O15260 269 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 MPC2O95563 127 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 LGI1O95970 557 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 GPX2P18283 190 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 CD40P25942 277 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 S100A11P31949 105 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 NIPAL3Q6P499 406 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 BAIAP2L2Q6UXY1 529 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 HACD2Q6Y1H2 254 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 RBM45Q8IUH3 476 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 LRRC18Q8N456 261 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 OR4D11Q8NGI4 311 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 STK35Q8TDR2 534 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 FOXRED1Q96CU9 486 aaPredicted RBP8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 MRPS24Q96EL2 167 aaKnown RBP8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 TAPBPLQ9BX59 468 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 SLCO5A1Q9H2Y9 848 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 NELFAQ9H3P2 528 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 TMEM38AQ9H6F2 299 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 SLC17A5Q9NRA2 495 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 SIRT7Q9NRC8 400 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 ZFP57Q9NU63 452 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 TPRKBQ9Y3C4 175 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 PUS1Q9Y606 427 aaKnown RBP eCLIP8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 COL6A5A8TX70 2615 aa8.42□□□□□ -1.06
NIF3L1-202ENST00000409020 A0A087X0M5 115 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 A0A096LPE4 126 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 A0A1B0GX30 115 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ELOA3DA6NLF2 546 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 C1orf196B1AJZ1 125 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 M0R082 166 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 M0R233 179 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 FABP7O15540 132 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 AHSA1O95433 338 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 THY1P04216 161 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 CRYBA1P05813 215 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 HLA-DOBP13765 273 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 SLC6A2P23975 617 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 MPGP29372 298 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 GRPRP30550 384 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 THBS4P35443 961 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ACVR1BP36896 505 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 CRYBA2P53672 197 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 CDH12P55289 794 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 PCBP3P57721 371 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 CXCR4P61073 352 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 RBX1P62877 108 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 MRPS11P82912 194 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 KRTAP1-1Q07627 177 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 POU4F2Q12837 409 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 HABP2Q14520 560 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 OR1Q1Q15612 314 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ZSWIM7Q19AV6 140 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ELOA3BQ3SY89 546 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ALG10BQ5I7T1 473 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 TMEM225Q6GV28 225 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 FDX2Q6P4F2 183 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 SLC22A25Q6T423 547 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 TMEM108Q6UXF1 575 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 SLC46A3Q7Z3Q1 461 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ALPK2Q86TB3 2170 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 PEG10Q86TG7 708 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 PAPD5Q8NDF8 572 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ELOA3Q8NG57 546 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 GPR32P1Q8NGA4 272 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 MFSD8Q8NHS3 518 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ZNF417Q8TAU3 575 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ZNF671Q8TAW3 534 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 MRGPRDQ8TDS7 321 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 GTPBP3Q969Y2 492 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 RCN3Q96D15 328 aa8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 ZNF837Q96EG3 531 aaPredicted RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 RRNAD1Q96FB5 475 aaKnown RBP8.41□□□□□ -1.06
NIF3L1-202ENST00000409020 BOD1Q96IK1 185 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms