RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IL15RAQ13261 267 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 OR2F1Q13607 317 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 ZMYND11Q15326 602 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 RAB12Q6IQ22 244 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 LILRB2Q8N423 598 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 FAM89BQ8N5H3 189 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 DTWD2Q8NBA8 298 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 FSCN3Q9NQT6 498 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 ASH2LQ9UBL3 628 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 MSGN1A6NI15 193 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 ZNF878C9JN71 531 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 FGF16O43320 207 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 DUS4LO95620 317 aaKnown RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 ICAM2P13598 275 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 RNASE10Q5GAN6 216 aaKnown RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 MRPL14Q6P1L8 145 aaKnown RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 FAM219AQ8IW50 185 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 ZSCAN4Q8NAM6 433 aaPredicted RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 OR10K1Q8NGX5 313 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 OR6X1Q8NH79 312 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 RASL10BQ96S79 203 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 GPR84Q9NQS5 396 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 MBD2Q9UBB5 411 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 GPN3Q9UHW5 284 aaPredicted RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 GPR132Q9UNW8 380 aa8.67□□□□□ -1.02
MSH2-202ENST00000406134 NOP16Q9Y3C1 178 aaKnown RBP8.67□□□□□ -1.02
MSH2-202ENST00000406134 CRHP06850 196 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 GP1BAP07359 652 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 DCNP07585 359 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 RAB3AP20336 220 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 CBX5P45973 191 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ZNF133P52736 654 aaPredicted RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 VAX1Q5SQQ9 334 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 AWAT2Q6E213 333 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 GLIPR1L1Q6UWM5 242 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 FOXL2NBQ6ZUU3 175 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 CPEB2Q7Z5Q1 589 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 ZNF248Q8NDW4 579 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 OR13G1Q8NGZ3 307 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 LIN37Q96GY3 246 aaPredicted RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 BANF2Q9H503 90 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 TMEM100Q9NV29 134 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 IGKV1D-8A0A087WSZ0 117 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 FAM74A7A6NL05 159 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 DISC1C4P0D8 188 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 BCAT2O15382 392 aaPredicted RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 TOX3O15405 576 aaPredicted RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 HEXBP07686 556 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 HIST1H1DP16402 221 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 AFF3P51826 1226 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 SRSF3P84103 164 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 ENDOGQ14249 297 aaKnown RBP8.66□□□□□ -1.02
MSH2-202ENST00000406134 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ANKRD55Q3KP44 614 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 FAM74A3Q4VXF1 159 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ACOT7LQ6ZUV0 252 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 BPIFCQ8NFQ6 507 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 OR5AP2Q8NGF4 316 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 STOML3Q8TAV4 291 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ELP5Q8TE02 316 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 MICU1Q9BPX6 476 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 OCSTAMPQ9BR26 566 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 SH2D2AQ9NP31 389 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ZNF581Q9P0T4 197 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 OSGIN2Q9Y236 505 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 LOC400499M0QZD8 3231 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 RTTNQ86VV8 2226 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 AQP7P3A6NL99 342 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 CTSSP25774 331 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 GNALP38405 381 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 HIST1H3AP68431 136 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 HIST2H3PS2Q5TEC6 136 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 HIST2H3AQ71DI3 136 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 OR5D14Q8NGL3 314 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 ARHGAP5-AS1Q96IT6 56 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 DNTTIP1Q9H147 329 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 SLC26A1Q9H2B4 701 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 PFDN2Q9UHV9 154 aa8.66□□□□□ -1.02
MSH2-202ENST00000406134 LOC102725191A0A1B0GVB3 256 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 FAM157CP0CG43 387 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 CNR1P21554 472 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 DLSTP36957 453 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 CX3CR1P49238 355 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 ZNF84P51523 738 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 GMFBP60983 142 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 IL13RA1P78552 427 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 CCL7P80098 99 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 PCOLCEQ15113 449 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 UBE2V2Q15819 145 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 CARD17Q5XLA6 110 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 PIK3IP1Q96FE7 263 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 MOB1AQ9H8S9 216 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.65□□□□□ -1.02
MSH2-202ENST00000406134 PLA2G2EQ9NZK7 142 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 KLRF1Q9NZS2 232 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 PPP4R1LQ9P1A2 415 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 MRPS28Q9Y2Q9 187 aaKnown RBP8.65□□□□□ -1.02
MSH2-202ENST00000406134 METTL21EPA6NDL7 271 aa8.65□□□□□ -1.02
MSH2-202ENST00000406134 SCRG1O75711 98 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms