RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 CCDC58Q4VC31 144 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 SORCS2Q96PQ0 1159 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 GSX2Q9BZM3 304 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 CCDC90BQ9GZT6 254 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 TPK1Q9H3S4 243 aa25.01■■□□□ 1.59
USP42-202ENST00000404008 VPS13CQ709C8 3753 aa25■■□□□ 1.59
USP42-202ENST00000404008 OR4C45A6NMZ5 311 aa25■■□□□ 1.59
USP42-202ENST00000404008 LALBAP00709 142 aa25■■□□□ 1.59
USP42-202ENST00000404008 CCL1P22362 96 aa25■■□□□ 1.59
USP42-202ENST00000404008 PTH2RP49190 550 aa25■■□□□ 1.59
USP42-202ENST00000404008 XAF1Q6GPH4 301 aa25■■□□□ 1.59
USP42-202ENST00000404008 PLPP7Q8NBV4 271 aa25■■□□□ 1.59
USP42-202ENST00000404008 TRMT61AQ96FX7 289 aaKnown RBP25■■□□□ 1.59
USP42-202ENST00000404008 FAM71F1Q96KD3 344 aaPredicted RBP25■■□□□ 1.59
USP42-202ENST00000404008 SLC30A2Q9BRI3 323 aa25■■□□□ 1.59
USP42-202ENST00000404008 TRIM36Q9NQ86 728 aa25■■□□□ 1.59
USP42-202ENST00000404008 LRCH1Q9Y2L9 728 aa25■■□□□ 1.59
USP42-202ENST00000404008 CHD3Q12873 2000 aaKnown RBP24.99■■□□□ 1.59
USP42-202ENST00000404008 A0A1B0GWJ7 208 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 LOC390937A0A1W2PQ73 354 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 ACKR3P25106 362 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 DOC2BQ14184 412 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 RPL22L1Q6P5R6 122 aaKnown RBP24.99■■□□□ 1.59
USP42-202ENST00000404008 ITFG2Q969R8 447 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 RAB1BQ9H0U4 201 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 MRPL15Q9P015 296 aaKnown RBP24.99■■□□□ 1.59
USP42-202ENST00000404008 ZDHHC8Q9ULC8 765 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 LSM2Q9Y333 95 aaKnown RBP24.99■■□□□ 1.59
USP42-202ENST00000404008 USF3Q68DE3 2245 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 AKAP9Q99996 3911 aa24.99■■□□□ 1.59
USP42-202ENST00000404008 CYSRT1A8MQ03 144 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 NDUFS7O75251 213 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 DHRS3O75911 302 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 IGHV1-46P01743 117 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 ISG15P05161 165 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 ADH4P08319 380 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 ATP6V1B1P15313 513 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 Q6ZSR3 168 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 CSNK2A3Q8NEV1 391 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 OR13G1Q8NGZ3 307 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 RPS4Y2Q8TD47 263 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 PERPQ96FX8 193 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 TMEM100Q9NV29 134 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 NOTCH2Q04721 2471 aa24.98■■□□□ 1.59
USP42-202ENST00000404008 TRBV2A0A0J9YWF9 115 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 SPRY3O43610 288 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 MTRF1O75570 445 aaKnown RBP24.97■■□□□ 1.59
USP42-202ENST00000404008 MAP2K3P46734 347 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 CDK5R1Q15078 307 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 TMEM244Q5VVB8 128 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 DOK3Q7L591 496 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 RDH10Q8IZV5 341 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 SIRT4Q9Y6E7 314 aaPredicted RBP24.97■■□□□ 1.59
USP42-202ENST00000404008 V9GYS6 101 aa24.97■■□□□ 1.59
USP42-202ENST00000404008 A0A1B0GVI7 797 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 LOC107986453A0A1B0GWG9 222 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 OGG1O15527 345 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 MRPS14O60783 128 aaKnown RBP24.96■■□□□ 1.59
USP42-202ENST00000404008 ZFPL1O95159 310 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 IGHV4-39P01824 125 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 ERCC1P07992 297 aaPredicted RBP24.96■■□□□ 1.59
USP42-202ENST00000404008 ATP5J2P56134 94 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 PCGF3Q3KNV8 242 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 LRRC75A-AS1Q8N1F1 130 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 SEMA6DQ8NFY4 1073 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 OR2Z1Q8NG97 314 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 OR5M11Q96RB7 305 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 DIRC2Q96SL1 478 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 NKIRAS2Q9NYR9 191 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 TEX15Q9BXT5 2789 aa24.96■■□□□ 1.59
USP42-202ENST00000404008 MAP1AP78559 2803 aaPredicted RBP24.96■■□□□ 1.59
USP42-202ENST00000404008 TMEM212A6NML5 194 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 MLNRO43193 412 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 SYT7O43581 403 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 CA6P23280 308 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 MAGEB1P43366 347 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 KCTD21Q4G0X4 260 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 FTMTQ8N4E7 242 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 ZNF676Q8N7Q3 588 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 OR14K1Q8NGZ2 314 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 OR5AK2Q8NH90 309 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 NEU4Q8WWR8 484 aaPredicted RBP24.95■■□□□ 1.59
USP42-202ENST00000404008 RHBDD3Q9Y3P4 386 aa24.95■■□□□ 1.59
USP42-202ENST00000404008 TRIM64A6NGJ6 449 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 DHRS7CA6NNS2 312 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 ANKRD30BLA7E2S9 258 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 F12P00748 615 aaPredicted RBP24.94■■□□□ 1.58
USP42-202ENST00000404008 EFNA4P52798 201 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 TAS2R43P59537 309 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 SPHARQ15513 63 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 TSTQ16762 297 aaKnown RBP24.94■■□□□ 1.58
USP42-202ENST00000404008 FAM209AQ5JX71 171 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 OR10AD1Q8NGE0 317 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 SMIM19Q96E16 107 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 ELMOD3Q96FG2 381 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 PDCD1LG2Q9BQ51 273 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 SLC22A4Q9H015 551 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 PIGLQ9Y2B2 252 aa24.94■■□□□ 1.58
USP42-202ENST00000404008 H0YL77 283 aa24.93■■□□□ 1.58
USP42-202ENST00000404008 H3BSH0 61 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms