RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 PDP1Q9P0J1 537 aaPredicted RBP12.79□□□□□ -0.36
TPM1-207ENST00000403994 KIR2DS1A0A191URI9 304 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 hCG_1807616A0A1W2PRN6 198 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 OOEPA6NGQ2 149 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 ANKRD30BLA7E2S9 258 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 GNGT2O14610 69 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 ENSAO43768 121 aaKnown RBP12.78□□□□□ -0.36
TPM1-207ENST00000403994 SELENOFO60613 162 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 E2F6O75461 281 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 HOXB6P17509 224 aaKnown RBP12.78□□□□□ -0.36
TPM1-207ENST00000403994 PRTN3P24158 256 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 DDOSTP39656 456 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 FGF12P61328 243 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 FLOT2Q14254 428 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 GINS1Q14691 196 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 OR8B8Q15620 311 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 KCNJ8Q15842 424 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 GFOD2Q3B7J2 385 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 DNAL1Q4LDG9 190 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 KLHL12Q53G59 568 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 AWAT1Q58HT5 328 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 PLBD1Q6P4A8 553 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 ZNF826PQ6ZT77 177 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 FAM57BQ71RH2 274 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 SHFQ7M4L6 423 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 TRPM8Q7Z2W7 1104 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 WDR86Q86TI4 376 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 GCSAMQ8N6F7 178 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 C3orf56Q8N813 242 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 OR52H1Q8NGJ2 320 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 MS4A7Q9GZW8 240 aaPredicted RBP12.78□□□□□ -0.36
TPM1-207ENST00000403994 OR51V1Q9H2C8 321 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 TRIM36Q9NQ86 728 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 C14orf119Q9NWQ9 140 aa12.78□□□□□ -0.36
TPM1-207ENST00000403994 PRR23D1E9PI22 279 aaPredicted RBP12.77□□□□□ -0.37
TPM1-207ENST00000403994 DYNC1I1O14576 645 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 PRODHO43272 600 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 ADAM20O43506 726 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 APOC1P02654 83 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 GRPP07492 148 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 PRR23D2P0DMB1 279 aaPredicted RBP12.77□□□□□ -0.37
TPM1-207ENST00000403994 EGR1P18146 543 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 NPY4RP50391 375 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 MZT1Q08AG7 82 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 BAMBIQ13145 260 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 RHOUQ7L0Q8 258 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 SPATA24Q86W54 205 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 FAM90A1Q86YD7 464 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 BBS1Q8NFJ9 593 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 OR8S1Q8NH09 359 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 OTOSQ8NHW6 89 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 SP140LQ9H930 580 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 BRD7Q9NPI1 651 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 ZNF319Q9P2F9 582 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 KLHDC2Q9Y2U9 406 aa12.77□□□□□ -0.37
TPM1-207ENST00000403994 SOX21Q9Y651 276 aaPredicted RBP12.77□□□□□ -0.37
TPM1-207ENST00000403994 TRAV38-1A0A0B4J264 116 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 MDFIC2A0A1B0GVS7 189 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 TNFRSF13BO14836 293 aaPredicted RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 GYG2O15488 501 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 FKBP6O75344 327 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 FCN3O75636 299 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 LYNP07948 512 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 RNASE1P07998 156 aaKnown RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 H2BFMP0C1H6 154 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 HKR1P10072 659 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 OSMP13725 252 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 SLC2A5P22732 501 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 CFL1P23528 166 aaKnown RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 NAA10P41227 235 aaPredicted RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 GSK3AP49840 483 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 PSMA6P60900 246 aaKnown RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 CSNK2BP67870 215 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 CBX1P83916 185 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 CDK5Q00535 292 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 SGK3Q96BR1 496 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 PAPOLGQ9BWT3 736 aaKnown RBP12.76□□□□□ -0.37
TPM1-207ENST00000403994 OR10A2Q9H208 303 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 PPP1R3EQ9H7J1 279 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 ZNF556Q9HAH1 456 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 ERVK-18Q9QC07 812 aa12.76□□□□□ -0.37
TPM1-207ENST00000403994 TCRBV3S1A0A5B6 114 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 CLDN34H7C241 214 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 LHBP01229 141 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 GYPAP02724 150 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 VWFP04275 2813 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 SFTPBP07988 381 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 ANXA8P13928 327 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 PRKACGP22612 351 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 CFHR2P36980 270 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 MTNR1AP48039 350 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 SLC9A3R2Q15599 337 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 TEX36Q5VZQ5 186 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 BRD3OSQ6XYD6 125 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 CPOQ8IVL8 374 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 ZNF454Q8N9F8 522 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 CSNK2A3Q8NEV1 391 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 OR1M1Q8NGA1 313 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 LRRC29Q8WV35 223 aa12.75□□□□□ -0.37
TPM1-207ENST00000403994 SLC25A28Q96A46 364 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms