RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 H2BFMP0C1H6 154 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 ANPEPP15144 967 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PCMT1P22061 227 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC2A5P22732 501 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 HSD11B1P28845 292 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 CD80P33681 288 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OPRL1P41146 370 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC15A1P46059 708 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 BLVRAP53004 296 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 CRISP1P54107 249 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 RAD23AP54725 363 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF121P58317 390 aaPredicted RBP4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 GRB2P62993 217 aaKnown RBP4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 APOFQ13790 326 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8G1Q15617 311 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 ATP6AP1Q15904 470 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SNAPC1Q16533 368 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TIGD6Q17RP2 521 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM155Q4W5P6 130 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 LYPD2Q6UXB3 125 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRRN1Q6UXK5 716 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 ZNF826PQ6ZT77 177 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SHFQ7M4L6 423 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SLC16A9Q7RTY1 509 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRSS45Q7RTY3 260 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 KLHL36Q8N4N3 616 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SPICQ8N5J4 248 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR4M2Q8NGB6 313 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR5K1Q8NHB7 308 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OTOSQ8NHW6 89 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 C22orf15Q8WYQ4 148 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRTOMTQ8WZ04 291 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM158Q8WZ71 300 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SGK3Q96BR1 496 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 REEP6Q96HR9 211 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PLEKHA8Q96JA3 519 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM246Q9BRR3 403 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 C19orf24Q9BVV8 132 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 SEMA6AQ9H2E6 1030 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 TMEM165Q9HC07 324 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 PAPOLBQ9NRJ5 636 aaKnown RBP4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 OPN4Q9UHM6 478 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 AP4S1Q9Y587 144 aa4.83□□□□□ -1.64
HMGB1P20-201ENST00000402555 ANK2Q01484 3957 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPIAL4EA0A075B759 164 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 IGHV3OR15-7A0A075B7D8 119 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 hCG_38984A0A1B0GV85 526 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 SAC3D1A6NKF1 404 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 LRRC30A6NM36 301 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPIAL4DF5H284 164 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 G3V2T6 193 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 MAGEB4O15481 346 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PRODHO43272 600 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 XRCC2O43543 280 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 TCF21O43680 179 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 FOXH1O75593 365 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 ATP5HO75947 161 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 VENTXO95231 258 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 GRPP07492 148 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 LYNP07948 512 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 WNT2P09544 360 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPIAL4FP0DN26 164 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 RPS2P15880 293 aaKnown RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 HOXB6P17509 224 aaKnown RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 EGR1P18146 543 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 ALOX5APP20292 161 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 FASP25445 335 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 THBS2P35442 1172 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 POLR2IP36954 125 aaKnown RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 CD200P41217 278 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 RASSF2P50749 326 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 CSNK2BP67870 215 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 ELF3P78545 371 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 FAM3AP98173 230 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PTGES3Q15185 160 aaKnown RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 ESCO2Q56NI9 601 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 SFRP4Q6FHJ7 346 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 C1QL2Q7Z5L3 287 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 KRT77Q7Z794 578 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 WDR86Q86TI4 376 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 KLBQ86Z14 1044 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 MUC20Q8N307 709 aaPredicted RBP4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PARP8Q8N3A8 854 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 RFLNBQ8N5W9 214 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 TCEANCQ8N8B7 351 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR8B12Q8NGG6 310 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR11L1Q8NGX0 322 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 SPATA3Q8NHX4 192 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PYDC1Q8WXC3 89 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PPP1R14AQ96A00 147 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 SPSB4Q96A44 273 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 PGAM5Q96HS1 289 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 IL4I1Q96RQ9 567 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 OR10A2Q9H208 303 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 TOR3AQ9H497 397 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 KRT84Q9NSB2 600 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 C1orf123Q9NWV4 160 aa4.82□□□□□ -1.64
HMGB1P20-201ENST00000402555 MRPL15Q9P015 296 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms