RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 GPR87Q9BY21 358 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 LAT2Q9GZY6 243 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 C20orf141Q9NUB4 165 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 NTN1O95631 604 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 TGIF2LYQ8IUE0 185 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 ECM29Q5VYK3 1845 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 MN1Q10571 1320 aaPredicted RBP12.41□□□□□ -0.42
VAPA-202ENST00000400000 KCNAB3O43448 404 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 AQP8O94778 261 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 OPRK1P41145 380 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 OR13C8Q8NGS7 320 aa12.41□□□□□ -0.42
VAPA-202ENST00000400000 RBFOX1Q9NWB1 397 aaKnown RBP12.41□□□□□ -0.42
VAPA-202ENST00000400000 UMAD1C9J7I0 102 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 M0R1X1 148 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CST7O76096 145 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CD3DP04234 171 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 WNT1P04628 370 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 PPP1CAP62136 330 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 ARIH2OSQ8N7S6 290 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 SLC25A43Q8WUT9 341 aaPredicted RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 ADGRL4Q9HBW9 690 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 COL16A1Q07092 1604 aaPredicted RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 LY86O95711 162 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CEACAM5P06731 702 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 SHBQ15464 509 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CD80P33681 288 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 KIAA0141Q14154 515 aaPredicted RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 ZNF239Q16600 458 aaKnown RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 ELFN2Q5R3F8 820 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 AVPI1Q5T686 147 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 DLEU7Q6UYE1 221 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 MORN4Q8NDC4 146 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 ADPRHL1Q8NDY3 354 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 OR10Z1Q8NGY1 313 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 OR2V1Q8NHB1 315 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 GALMQ96C23 342 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CMTM3Q96MX0 182 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 NUDT9Q9BW91 350 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 SLC25A22Q9H936 323 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 IGLV3-10A0A075B6K4 115 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 TARM1B6A8C7 271 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 SYT5O00445 386 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 FABP1P07148 127 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 OR2M7Q8NG81 312 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 CTDSP1Q9GZU7 261 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 SPAARA0A1B0GVQ0 90 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 ZNF320A2RRD8 509 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 MT-CO3P00414 261 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 B3GNTL1Q67FW5 361 aaPredicted RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 LYG1Q8N1E2 194 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 MFSD4AQ8N468 514 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 DPF1Q92782 380 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 MARC2Q969Z3 335 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 DUS3LQ96G46 650 aaKnown RBP12.4□□□□□ -0.42
VAPA-202ENST00000400000 KDM3BQ7LBC6 1761 aa12.4□□□□□ -0.42
VAPA-202ENST00000400000 LIMK1P53667 647 aa12.4□□□□□ -0.43
VAPA-202ENST00000400000 KRTDAPP60985 99 aa12.4□□□□□ -0.43
VAPA-202ENST00000400000 RHNO1Q9BSD3 238 aa12.4□□□□□ -0.43
VAPA-202ENST00000400000 KCNIP2Q9NS61 270 aa12.4□□□□□ -0.43
VAPA-202ENST00000400000 RYDENQ9NUL5 291 aaKnown RBP12.4□□□□□ -0.43
VAPA-202ENST00000400000 CCDC187A0A096LP49 1063 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 CEACAM6P40199 344 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 KIRREL2Q6UWL6 708 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SPEM1Q8N4L4 309 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 KIAA1958Q8N8K9 716 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 OR1L4Q8NGR5 311 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SIGLEC11Q96RL6 698 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SLC25A37Q9NYZ2 338 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
VAPA-202ENST00000400000 TRGV10A0A0A0MS01 117 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 KIR2DS1A0A191URI9 304 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SCO1O75880 301 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 KIR2DS4P43632 304 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 KIR2DS1Q14954 304 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 ZNF620Q6ZNG0 422 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 IGHV5-51A0A0C4DH38 117 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 OR2A25A4D2G3 310 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 METTL12A8MUP2 240 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 ZNF727A8MUV8 499 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 ST8SIA3O43173 380 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 ADRA2CP18825 462 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 FABP5Q01469 135 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 INSL4Q14641 139 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 RAB35Q15286 201 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 LSRQ86X29 649 aaPredicted RBP12.39□□□□□ -0.43
VAPA-202ENST00000400000 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 TNFRSF10CO14798 259 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 DFFBO76075 338 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 METTL15P1P0C7V9 234 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SLC25A35Q3KQZ1 300 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 SLC24A4Q8NFF2 622 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 PSD2Q9BQI7 771 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 TRDV1A0A1B0GX56 115 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 MMP7P09237 267 aaPredicted RBP12.39□□□□□ -0.43
VAPA-202ENST00000400000 ZNF17P17021 662 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 FABP9Q0Z7S8 132 aa12.39□□□□□ -0.43
VAPA-202ENST00000400000 DERL3Q96Q80 235 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms