RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 THEM6Q8WUY1 208 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 RAB40AQ8WXH6 277 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 DVL3Q92997 716 aaPredicted RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 REEP6Q96HR9 211 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 OR10A2Q9H208 303 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 C14orf119Q9NWQ9 140 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 DNAJC27Q9NZQ0 273 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 KIF17Q9P2E2 1029 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 CLN8Q9UBY8 286 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
VCX3A-202ENST00000398729 DOCK11Q5JSL3 2073 aa11.2□□□□□ -0.62
VCX3A-202ENST00000398729 IGHV2-70DA0A0C4DH43 119 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 PHYHO14832 338 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 SELENOFO60613 162 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 GRPP07492 148 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 LYNP07948 512 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 PPIAL4GP0DN37 164 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 CD80P33681 288 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 OPRL1P41146 370 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 RPS7P62081 194 aaKnown RBP11.19□□□□□ -0.62
VCX3A-202ENST00000398729 PAX2Q02962 417 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 OR8B8Q15620 311 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 SLC35D3Q5M8T2 416 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 LYPD2Q6UXB3 125 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 CPOQ8IVL8 374 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 BOLLQ8N9W6 283 aaKnown RBP11.19□□□□□ -0.62
VCX3A-202ENST00000398729 C19orf18Q8NEA5 215 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 OR8S1Q8NH09 359 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 OTOSQ8NHW6 89 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 DNAJC9Q8WXX5 260 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 SGK3Q96BR1 496 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 NRBF2Q96F24 287 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 PGAM5Q96HS1 289 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 AMELYQ99218 206 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 MMADHCQ9H3L0 296 aaPredicted RBP11.19□□□□□ -0.62
VCX3A-202ENST00000398729 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 TRIM36Q9NQ86 728 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 NOTCH1P46531 2555 aa11.19□□□□□ -0.62
VCX3A-202ENST00000398729 TRAV38-1A0A0B4J264 116 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 hCG_38984A0A1B0GV85 526 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 hCG_1807616A0A1W2PRN6 198 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 LGALS8O00214 317 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 GSC2O15499 205 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 PSMB10P40306 273 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 NPY4RP50391 375 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 RASSF2P50749 326 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 SNCBQ16143 134 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 GFOD2Q3B7J2 385 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 KLF17Q5JT82 389 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 TMEM236Q5W0B7 351 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 WDR25Q64LD2 544 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 SFRP4Q6FHJ7 346 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 FTMTQ8N4E7 242 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 C3orf56Q8N813 242 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 CSNK2A3Q8NEV1 391 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 GCDHQ92947 438 aaPredicted RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 TECTBQ96PL2 329 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 CADM1Q9BY67 442 aaKnown RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 RGCCQ9H4X1 137 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 SLC25A19Q9HC21 320 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 PAPOLBQ9NRJ5 636 aaKnown RBP11.18□□□□□ -0.62
VCX3A-202ENST00000398729 C1orf123Q9NWV4 160 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 ERVK-18Q9QC07 812 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF69Q9UC07 566 aa11.18□□□□□ -0.62
VCX3A-202ENST00000398729 KIR2DS1A0A191URI9 304 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 OOEPA6NGQ2 149 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 C3orf80F5H4A9 247 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 NDUFA2O43678 99 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 TIPRLO75663 272 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 GNALP38405 381 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 NAA10P41227 235 aaPredicted RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 GSK3AP49840 483 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 CRISP1P54107 249 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 HOXA4Q00056 320 aaPredicted RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 BNIP1Q12981 228 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 SNAPC1Q16533 368 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF841Q6ZN19 808 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF826PQ6ZT77 177 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 DOK3Q7L591 496 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 PARP8Q8N3A8 854 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 SIGLECL1Q8N7X8 197 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ZDHHC22Q8N966 263 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 BBS1Q8NFJ9 593 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 DACT3Q96B18 629 aaPredicted RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 UPRTQ96BW1 309 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 NUDT16L1Q9BRJ7 211 aaKnown RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 PAPOLGQ9BWT3 736 aaKnown RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 MS4A7Q9GZW8 240 aaPredicted RBP11.17□□□□□ -0.62
VCX3A-202ENST00000398729 NIPAL2Q9H841 368 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ESM1Q9NQ30 184 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ZNF319Q9P2F9 582 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 LAMP5Q9UJQ1 280 aa11.17□□□□□ -0.62
VCX3A-202ENST00000398729 ANXA2P2A6NMY6 339 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 ADAM20O43506 726 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 ENSAO43768 121 aaKnown RBP11.16□□□□□ -0.62
VCX3A-202ENST00000398729 ALOX5APP20292 161 aa11.16□□□□□ -0.62
VCX3A-202ENST00000398729 SLC2A5P22732 501 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms