RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 NTN1O95631 604 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ALDH3B1P43353 468 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 UBE2MP61081 183 aaKnown RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 INSM1Q01101 510 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 SKP2Q13309 424 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR8B8Q15620 311 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 C1QL3Q5VWW1 255 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ACOT7LQ6ZUV0 252 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ARRDC1Q8N5I2 433 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 RIMS4Q9H426 269 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 GCM1Q9NP62 436 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 LHX9Q9NQ69 397 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 MKRN2OSH3BPM6 223 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 SH2D1BO14796 132 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 PDGFAP04085 211 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 IL5P05113 134 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 NKX2-1P43699 371 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 PPT1P50897 306 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ARF1P84077 181 aaKnown RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 TCTE3Q8IZS6 198 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR11G2Q8NGC1 345 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR51H1Q8NH63 302 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 PILRAQ9UKJ1 303 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 DUSP1P28562 367 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OSR2Q8N2R0 312 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR13C8Q8NGS7 320 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 UFSP2Q9NUQ7 469 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 PLA2G3Q9NZ20 509 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR5V1Q9UGF6 321 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 A0A1B0GTH9 108 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 TGM6O95932 706 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 HAAOP46952 286 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 RAG2P55895 527 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 S100A12P80511 92 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 TLE4Q04727 773 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ATPAF1Q5TC12 328 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 CCDC71Q8IV32 467 aaPredicted RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 ASB13Q8WXK3 278 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 GPA33Q99795 319 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 EGLN1Q9GZT9 426 aa12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 MRM2Q9UI43 246 aaKnown RBP12.73□□□□□ -0.37
PCDHGA11-201ENST00000398587 HSD17B6O14756 317 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 DFFBO76075 338 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 GLI4P10075 376 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 ANKRD16Q6P6B7 361 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 KANSL1Q7Z3B3 1105 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR4A16Q8NH70 328 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 TERB2Q8NHR7 220 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 OCIAD1Q9NX40 245 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 MTFP1Q9UDX5 166 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 CSAG2Q9Y5P2 127 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 PI3P19957 117 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 NOVA1P51513 510 aaKnown RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF718Q3SXZ3 478 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2W3Q7Z3T1 314 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 LYG2Q86SG7 212 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR6X1Q8NH79 312 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 SAV1Q9H4B6 383 aaPredicted RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 APC2O95996 2303 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 FAM221AA4D161 298 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 IFNA10P01566 189 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 SNRNP70P08621 437 aaKnown RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 SIGLEC14Q08ET2 396 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 SLC22A18ASQ8N1D0 253 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 RBPMSQ93062 196 aaKnown RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 DECR2Q9NUI1 292 aa12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 MRPS18AQ9NVS2 196 aaKnown RBP12.72□□□□□ -0.37
PCDHGA11-201ENST00000398587 FCGR2CP31995 323 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 MESTQ5EB52 335 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 ZNF321PQ8N8H1 164 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 M1APQ8TC57 530 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 FAM157BP0CG42 384 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 KITLGP21583 273 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 AADACP22760 399 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 RAB1AP62820 205 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 SNRPNP63162 240 aaKnown RBP12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 Q7L0L9 218 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 FSCN3Q9NQT6 498 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 CCDC88CQ9P219 2028 aa12.71□□□□□ -0.37
PCDHGA11-201ENST00000398587 OR2M5A3KFT3 312 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 GCM2O75603 506 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 NDUFB6O95139 128 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 CCL4P13236 92 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 RNPS1Q15287 305 aaKnown RBP12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 TMEM217Q8N7C4 229 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 ZNF275Q9NSD4 429 aaPredicted RBP12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 C17orf112F2Z3M2 114 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 PYCARD-AS1I3L0S3 204 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 TAAR5O14804 337 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 DHRS3O75911 302 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 ACAA2P42765 397 aaKnown RBP12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 MAGEB1P43366 347 aa12.71□□□□□ -0.38
PCDHGA11-201ENST00000398587 RAC3P60763 192 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms