RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 BTBD17A6NE02 478 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 GGT3PA6NGU5 568 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 BHLHE40O14503 412 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 OR10H3O60404 316 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 TSPAN15O95858 294 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 HLA-DQA2P01906 255 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 GYPAP02724 150 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 GRPP07492 148 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 CSF1P09603 554 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF823P16415 610 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 EEF1B2P24534 225 aaKnown RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 SLC6A6P31641 620 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 GRK5P34947 590 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 SMIM11AP58511 58 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 HOXA4Q00056 320 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF92Q03936 586 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 KRT72Q14CN4 511 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 MICBQ29980 383 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 FGD3Q5JSP0 725 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 DHRS7BQ6IAN0 325 aaPredicted RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 DRAM2Q6UX65 266 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 C1orf122Q6ZSJ8 110 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 FAM90A1Q86YD7 464 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 C1QL4Q86Z23 238 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 GCSAMQ8N6F7 178 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 RCN3Q96D15 328 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 MAP6Q96JE9 813 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 C7orf34Q96L11 122 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 ADAT1Q9BUB4 502 aaKnown RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 PNRC2Q9NPJ4 139 aaKnown RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 RPRD1BQ9NQG5 326 aaKnown RBP7.2□□□□□ -1.26
CAPN3-208ENST00000397204 FBLN5Q9UBX5 448 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 VPREB3Q9UKI3 123 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 CAPN7Q9Y6W3 813 aa7.2□□□□□ -1.26
CAPN3-208ENST00000397204 TRBV4-1A0A0J9YWV2 114 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OR6C68A6NDL8 312 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 RNASEK-C17orf49H0YIS7 233 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 NME4O00746 187 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 FCN3O75636 299 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 HIST1H1CP16403 213 aaKnown RBP7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OTX1P32242 354 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-208ENST00000397204 NAA10P41227 235 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-208ENST00000397204 TGM4P49221 684 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 GSK3BP49841 420 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 SLC7A2P52569 658 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 SEC23BQ15437 767 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 SLC35E4Q6ICL7 350 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 C11orf88Q6PI97 169 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 ZNF826PQ6ZT77 177 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 SLC36A1Q7Z2H8 476 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 VMO1Q7Z5L0 202 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 PDZD9Q8IXQ8 264 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OR4K13Q8NH42 304 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OR5R1Q8NH85 324 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 ST8SIA4Q92187 359 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 DHRS1Q96LJ7 313 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 FUZQ9BT04 418 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 IFT27Q9BW83 186 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OR52D1Q9H346 318 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 OPA3Q9H6K4 179 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 EFCAB1Q9HAE3 211 aa7.19□□□□□ -1.26
CAPN3-208ENST00000397204 MRPL22Q9NWU5 206 aaKnown RBP7.19□□□□□ -1.26
CAPN3-208ENST00000397204 hCG_1807616A0A1W2PRN6 198 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 ANKRD61A6NGH8 418 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 A6NLC8 198 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 ANKRD30BLA7E2S9 258 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 NDUFB3O43676 98 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 TIPRLO75663 272 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OPN1MWP04001 364 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OPN1MW2P0DN77 364 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OPN1MW3P0DN78 364 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 IFNGR2P38484 337 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 KIR2DS4P43632 304 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 BEAN1Q3B7T3 259 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 SNAI3Q3KNW1 292 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 GLYATL3Q5SZD4 288 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 KPRPQ5T749 579 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 ATPAF1Q5TC12 328 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 C8orf82Q6P1X6 216 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 HACD2Q6Y1H2 254 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 Q6ZTK2 550 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 REC114Q7Z4M0 266 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 C11orf53Q8IXP5 236 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 DTX3Q8N9I9 347 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OR4C15Q8NGM1 316 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OR52J3Q8NH60 311 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 OR2AE1Q8NHA4 323 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 FAM162AQ96A26 154 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 SPSB4Q96A44 273 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 C12orf43Q96C57 262 aaKnown RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 DDOQ99489 341 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 CCL13Q99616 98 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 KCNJ15Q99712 375 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 KCTD14Q9BQ13 255 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 WNT10AQ9GZT5 417 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 NSRP1Q9H0G5 558 aaKnown RBP7.18□□□□□ -1.26
CAPN3-208ENST00000397204 SP140LQ9H930 580 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 VIPAS39Q9H9C1 493 aa7.18□□□□□ -1.26
CAPN3-208ENST00000397204 DCAF13Q9NV06 445 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms