RNA–Protein interactions for RNA: ENST00000396625.3

COL4A4-201, Transcript of collagen type IV alpha 4 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A4, Length 9,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4-201ENST00000396625 OR4S1Q8NGB4 309 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 HGDQ93099 445 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 CD1BP29016 333 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 RUNX3Q13761 415 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 SPNS3Q6ZMD2 512 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 CTSLP07711 333 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 SP1P08047 785 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 Q56UQ5 140 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 TMEM25Q86YD3 366 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 OR52L2PQ8NGH6 319 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 OR1N2Q8NGR9 330 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 GALMQ96C23 342 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 C2orf50Q96LR7 162 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 PACRGQ96M98 296 aaPredicted RBP9.4□□□□□ -0.9
COL4A4-201ENST00000396625 ZIC5Q96T25 663 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 ADAT1Q9BUB4 502 aaKnown RBP9.4□□□□□ -0.9
COL4A4-201ENST00000396625 TMEM147Q9BVK8 224 aa9.4□□□□□ -0.9
COL4A4-201ENST00000396625 A0A0U1RQS6 177 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 TNFRSF10CO14798 259 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 CDC20Q12834 499 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 GGTA1PQ4G0N0 100 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF343Q6P1L6 599 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 OR4F17Q8NGA8 305 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 WDR89Q96FK6 387 aaPredicted RBP9.4□□□□□ -0.91
COL4A4-201ENST00000396625 OR6C1Q96RD1 312 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 OR2J1Q9GZK6 312 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 MMP24Q9Y5R2 645 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 PJVKQ0ZLH3 352 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 NIPSNAP1Q9BPW8 284 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 C1QTNF3Q9BXJ4 246 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 TREX1Q9NSU2 369 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 IL17BQ9UHF5 180 aa9.4□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF646O15015 1829 aaPredicted RBP9.4□□□□□ -0.91
COL4A4-201ENST00000396625 RNASE1P07998 156 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 FURINP09958 794 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 GLRA1P23415 457 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 PCBP3P57721 371 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 LSM11P83369 360 aaKnown RBP eCLIP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TOMM34Q15785 309 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ISG20Q96AZ6 181 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 GPR87Q9BY21 358 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 EMCNQ9ULC0 261 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 EP300Q09472 2414 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MBTPS2O43462 519 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 CTNSO60931 367 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 IL5P05113 134 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TEAD1P28347 426 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 C21orf58P58505 322 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TPBGQ13641 420 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 HLXQ14774 488 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OR4D10Q8NGI6 311 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 DOCK3Q8IZD9 2030 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MS4A18H0YCH9 400 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 PRSS1P07477 247 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 DRD1P21728 446 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OPRK1P41145 380 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ACAA2P42765 397 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MS4A18Q3C1V0 323 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SOWAHCQ53LP3 525 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TTC32Q5I0X7 151 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 PIANPQ8IYJ0 282 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TMEFF1Q8IYR6 380 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MDGA1Q8NFP4 955 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TRMT61AQ96FX7 289 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 LCORQ96JN0 433 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SNX22Q96L94 193 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TMEM208Q9BTX3 173 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MARCH5Q9NX47 278 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 CA12O43570 354 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ONECUT2O95948 504 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ANKRD34CP0C6C1 535 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ARR3P36575 388 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OTUD1Q5VV17 481 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 NKAIN2Q5VXU1 208 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 TGIF2LYQ8IUE0 185 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 MISP3Q96FF7 219 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 P2RY12Q9H244 342 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 RNF167Q9H6Y7 350 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 HCRTR1O43613 425 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF737O75373 536 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 CLPPQ16740 277 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SAXO2Q658L1 398 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 DUS3LQ96G46 650 aaKnown RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 HES7Q9BYE0 225 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 USP22Q9UPT9 525 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SNED1Q8TER0 1413 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SLC22A20A6NK97 555 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 LY86O95711 162 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 PI3P19957 117 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ADPRHP54922 357 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ANKRD16Q6P6B7 361 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ABI3BPQ7Z7G0 1075 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 GLCCI1Q86VQ1 547 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 CBARPQ8N350 705 aaPredicted RBP9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OR8A1Q8NGG7 326 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OR52B4Q8NGK2 314 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 OR51E1Q8TCB6 317 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 SMIM19Q96E16 107 aa9.39□□□□□ -0.91
COL4A4-201ENST00000396625 ZNF552Q9H707 407 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms