RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GPR85P60893 370 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 FOXF1Q12946 379 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 LPAL2Q16609 132 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 PLAC9Q5JTB6 97 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 OGFOD3Q6PK18 319 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 ZSCAN4Q8NAM6 433 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM104Q8NE00 496 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 TERB2Q8NHR7 220 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 ELP5Q8TE02 316 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM230Q96A57 120 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 C1orf147Q96MC9 270 aaPredicted RBP16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 SOX7Q9BT81 388 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM100Q9NV29 134 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 CACNA1HO95180 2353 aa16.24■□□□□ 0.19
PCDHA1-202ENST00000394633 A0A0B4J2A0 478 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 SOCS1O15524 211 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 ABOP16442 354 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 GLIPR1L1Q6UWM5 242 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 LDLRAD3Q86YD5 345 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 OR5AS1Q8N127 324 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 ARMC10Q8N2F6 343 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 MESP1Q9BRJ9 268 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 C5orf66Q9H5L9 145 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 SHPKQ9UHJ6 478 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 GPR132Q9UNW8 380 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 MRPS28Q9Y2Q9 187 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 ADAMTS20P59510 1910 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 LIPT2A6NK58 231 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 H3BML4 177 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 MPIG6BO95866 241 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 CHRM2P08172 466 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 ZNF20P17024 532 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 PRKACAP17612 351 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 C17orf67Q0P5P2 114 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 PNLIPRP3Q17RR3 467 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM128Q5BJH2 165 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 BAP18Q8IXM2 172 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 LINC00518Q8N0U6 118 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 THAP3Q8WTV1 239 aaPredicted RBP16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 DDIT4LQ96D03 193 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 ADAT1Q9BUB4 502 aaKnown RBP16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 SERINC1Q9NRX5 453 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 B3GAT1Q9P2W7 334 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 LHFPL6Q9Y693 200 aa16.23■□□□□ 0.19
PCDHA1-202ENST00000394633 LAP3P28838 519 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 SRSF3P84103 164 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 NAAAQ02083 359 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 PLEKHN1Q494U1 663 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM71Q6P5X7 295 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM88Q6PEY1 159 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 SVBPQ8N300 66 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 D2HGDHQ8N465 521 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 WNT2BQ93097 391 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 MRPL13Q9BYD1 178 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 PRR13Q9NZ81 148 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 RALGAPA1Q6GYQ0 2036 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 A0A1B0GX78 115 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 RAD51DO75771 328 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 CFIP05156 583 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 GSTP1P09211 210 aaKnown RBP16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 ANOS1P23352 680 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 OR3A4PP47883 348 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 NPY4RP50391 375 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 SCRN3Q0VDG4 424 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 VAX1Q5SQQ9 334 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 BHLHE23Q8NDY6 225 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 PLPP5Q8NEB5 264 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 TMED6Q8WW62 240 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 RAB3CQ96E17 227 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM41AQ96HV5 264 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 MICU1Q9BPX6 476 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 SAV1Q9H4B6 383 aaPredicted RBP16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 BANF2Q9H503 90 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 ALKBH4Q9NXW9 302 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 NDRG3Q9UGV2 375 aa16.22■□□□□ 0.19
PCDHA1-202ENST00000394633 IGHV1OR21-1A0A087WYE8 117 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 A0A1W2PP11 408 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 MSGN1A6NI15 193 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 EFNA2O43921 213 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 CDC14BO60729 498 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 ADAP1O75689 374 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 SFT2D2O95562 160 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 HIST1H1DP16402 221 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 TMEM50BP56557 158 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 CYCSP99999 105 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 AIMP2Q13155 320 aaKnown RBP16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 SLC9A3R2Q15599 337 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 SGCAQ16586 387 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 NKAPLQ5M9Q1 402 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 NAA40Q86UY6 237 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 ARL11Q969Q4 196 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 FANCFQ9NPI8 374 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 ZNF629Q9UEG4 869 aaPredicted RBP16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 SRPK3Q9UPE1 567 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 B3GALT5Q9Y2C3 310 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 FLVCR1Q9Y5Y0 555 aa16.21■□□□□ 0.19
PCDHA1-202ENST00000394633 A0A1W2PNV4 684 aa16.21■□□□□ 0.18
PCDHA1-202ENST00000394633 CEACAM18A8MTB9 384 aa16.21■□□□□ 0.18
PCDHA1-202ENST00000394633 SLC2A1P11166 492 aa16.21■□□□□ 0.18
PCDHA1-202ENST00000394633 EPHA8P29322 1005 aaPredicted RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms