RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 CAB39Q9Y376 341 aaPredicted RBP12.59□□□□□ -0.39
CHMP3-202ENST00000393773 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-202ENST00000393773 GSTA4O15217 222 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 DIRAS1O95057 198 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 HLA-DQA2P01906 255 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 SELLP14151 372 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 MUC1P15941 1255 aaPredicted RBP12.58□□□□□ -0.4
CHMP3-202ENST00000393773 NCK1P16333 377 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 EFNB2P52799 333 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 CSNK2BP67870 215 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 SF3A3Q12874 501 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHMP3-202ENST00000393773 SLC35E4Q6ICL7 350 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 LYPD4Q6UWN0 246 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 WDR82Q6UXN9 313 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 LNX2Q8N448 690 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 PNKDQ8N490 385 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 OR52J3Q8NH60 311 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 LRRC29Q8WV35 223 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 CFHR4Q92496 578 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 TNFRSF14Q92956 283 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 FAM162AQ96A26 154 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 SPSB4Q96A44 273 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 DCTN5Q9BTE1 182 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 OPA3Q9H6K4 179 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 RNPEPL1Q9HAU8 725 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 FGFR1OP2Q9NVK5 253 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 C14orf119Q9NWQ9 140 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 PRPF19Q9UMS4 504 aaKnown RBP12.58□□□□□ -0.4
CHMP3-202ENST00000393773 SIGLEC9Q9Y336 463 aa12.58□□□□□ -0.4
CHMP3-202ENST00000393773 A0A1W2PRD5 423 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 A0A1W2PRF3 423 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 A0A1W2PRM7 423 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 ACOT8O14734 319 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 SLC22A2O15244 555 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 SLC2A1P11166 492 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 AMY2BP19961 511 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 GABRA5P31644 462 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 MZT1Q08AG7 82 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 MICBQ29980 383 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 STUMQ69YW2 141 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 ZDHHC21Q8IVQ6 265 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 CMTM4Q8IZR5 234 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 PPP1R35Q8TAP8 253 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 ZNRF4Q8WWF5 429 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 SEH1LQ96EE3 360 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 IFT27Q9BW83 186 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 PPA2Q9H2U2 334 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 DNAJB11Q9UBS4 358 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 COMMD3-BMI1R4GMX3 469 aa12.57□□□□□ -0.4
CHMP3-202ENST00000393773 GPR37O15354 613 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 EEF1B2P24534 225 aaKnown RBP12.56□□□□□ -0.4
CHMP3-202ENST00000393773 PYCR1P32322 319 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHMP3-202ENST00000393773 IKZF1Q13422 519 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 FAM189A2Q15884 450 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 Q6ZTK2 550 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 SLC36A1Q7Z2H8 476 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 REC114Q7Z4M0 266 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 OR1M1Q8NGA1 313 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 C12orf43Q96C57 262 aaKnown RBP12.56□□□□□ -0.4
CHMP3-202ENST00000393773 COPS4Q9BT78 406 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 TLNRD1Q9H1K6 362 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 TOR3AQ9H497 397 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 ABCD2Q9UBJ2 740 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 FOXJ3Q9UPW0 622 aa12.56□□□□□ -0.4
CHMP3-202ENST00000393773 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
CHMP3-202ENST00000393773 DNAH9Q9NYC9 4486 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 MEIOCA2RUB1 952 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 MEGF11A6BM72 1044 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 ANKRD61A6NGH8 418 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 TVP23AA6NH52 213 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 H3BUX3 64 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 XRCC2O43543 280 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 PAHP00439 452 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 SEMG1P04279 462 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 NOS3P29474 1203 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 GRK5P34947 590 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 TGM4P49221 684 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 C1orf122Q6ZSJ8 110 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 DPY19L4Q7Z388 723 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 DCXRQ7Z4W1 244 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 KLHDC1Q8N7A1 406 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 BEND2Q8NDZ0 799 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 OR8S1Q8NH09 359 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 RP9Q8TA86 221 aaKnown RBP12.55□□□□□ -0.4
CHMP3-202ENST00000393773 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 DDOQ99489 341 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 KCTD14Q9BQ13 255 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-202ENST00000393773 PPP1R3EQ9H7J1 279 aa12.55□□□□□ -0.4
CHMP3-202ENST00000393773 hCG_38984A0A1B0GV85 526 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 ANKRD30BLA7E2S9 258 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 NDUFB3O43676 98 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 IDH3BO43837 385 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 TIPRLO75663 272 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 ZNF823P16415 610 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 DDOSTP39656 456 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 GSSP48637 474 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 PRKXP51817 358 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 UBE2E1P51965 193 aa12.54□□□□□ -0.4
CHMP3-202ENST00000393773 FAM3AP98173 230 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms