RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TOXO94900 526 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CNOT4O95628 575 aaKnown RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 EDN3P14138 238 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CDK2P24941 298 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 NR4A2P43354 598 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 EFNB2P52799 333 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZNF92Q03936 586 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 OXA1LQ15070 435 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 GABRA6Q16445 453 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 AWAT2Q6E213 333 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 FAM166AQ6J272 317 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZNF529Q6P280 563 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 OR5AS1Q8N127 324 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 OR4D6Q8NGJ1 314 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 SNRNP27Q8WVK2 155 aaKnown RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 PP6455Q8WZ26 134 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 HAVCR1Q96D42 359 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 SNRNP40Q96DI7 357 aaKnown RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 GAL3ST1Q99999 423 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 THAP7Q9BT49 309 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 C1QTNF5Q9BXJ0 243 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ATG5Q9H1Y0 275 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ABCG5Q9H222 651 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 RGCCQ9H4X1 137 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 METTL17Q9H7H0 456 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 GPR173Q9NS66 373 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ASF1BQ9NVP2 202 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZNF391Q9UJN7 358 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 TBC1D24Q9ULP9 559 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 NCOR2Q9Y618 2525 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CHD8Q9HCK8 2581 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 LOC390937A0A1W2PQ73 354 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 HOXD4P09016 255 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 ACKR3P25106 362 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CFPP27918 469 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 GSK3AP49840 483 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 TDGF1P3P51864 188 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 MALLQ13021 153 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 UBE2V2Q15819 145 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 PRR30Q53SZ7 412 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 OR10K2Q6IF99 312 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 MTFR2Q6P444 385 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 UNQ6494/PRO21346Q6UXR6 183 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CXorf67Q86X51 503 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 ANGPTL5Q86XS5 388 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZNF584Q8IVC4 421 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 CCDC36Q8IYA8 594 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZNF101Q8IZC7 436 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 NAXEQ8NCW5 288 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 SLC30A7Q8NEW0 376 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 SETD6Q8TBK2 473 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ZCCHC14Q8WYQ9 949 aaKnown RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 RFT1Q96AA3 541 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 APOBEC3DQ96AK3 386 aaPredicted RBP7.5□□□□□ -1.21
TDP1-203ENST00000393454 C10orf35Q96D05 121 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 POM121L2Q96KW2 1035 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 UQCC2Q9BRT2 126 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 C1QTNF6Q9BXI9 259 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 OR51B6Q9H340 312 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 DIABLOQ9NR28 239 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 PTTG3PQ9NZH4 202 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 SH3BGRL2Q9UJC5 107 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 ATMQ13315 3056 aa7.5□□□□□ -1.21
TDP1-203ENST00000393454 IGKV1-9A0A0C4DH69 117 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 CTAG2O75638 210 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 AGFG2O95081 481 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 PTTG1O95997 202 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 SERPINA5P05154 406 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 CRHP06850 196 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 CD37P11049 281 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 SPNP16150 400 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 IDH3GP51553 393 aaPredicted RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 FAM3AP98173 230 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 TBC1D28Q2M2D7 210 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 EIF2S3LQ2VIR3 472 aaKnown RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 Q6ZSR3 168 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 BEND4Q6ZU67 534 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 UTS2BQ765I0 119 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 GDPD3Q7L5L3 318 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 MRPL21Q7Z2W9 205 aaKnown RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 RNF144BQ7Z419 303 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 PNLDC1Q8NA58 520 aaKnown RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 PIGTQ969N2 578 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 FAM122AQ96E09 287 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 CHST5Q9GZS9 411 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 TP63Q9H3D4 680 aaPredicted RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 RABL2AQ9UBK7 228 aaPredicted RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 RABL2BQ9UNT1 228 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 MRPS28Q9Y2Q9 187 aaKnown RBP7.49□□□□□ -1.21
TDP1-203ENST00000393454 ZGRF1Q86YA3 2104 aa7.49□□□□□ -1.21
TDP1-203ENST00000393454 TRAV18A0A075B6X5 111 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 hCG_38984A0A1B0GV85 526 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 GGT3PA6NGU5 568 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 DHRS7CA6NNS2 312 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 LANCL1O43813 399 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 BPNT1O95861 308 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 NGFP01138 241 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CGAP01215 116 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 ALDOBP05062 364 aa7.48□□□□□ -1.21
TDP1-203ENST00000393454 CELA3BP08861 270 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms