RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TLCD2A6NGC4 264 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 CDC14BO60729 498 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PRRX1P54821 245 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 UCP3P55916 312 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM33P57088 247 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 NTHL1P78549 312 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GPR18Q14330 331 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 LY6G5CQ5SRR4 150 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 TSLPQ969D9 159 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MYEOVQ96EZ4 313 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 ACY3Q96HD9 319 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 NMNAT2Q9BZQ4 307 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PLEKHA2Q9HB19 425 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 HAO2Q9NYQ3 351 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 WSB2Q9NYS7 404 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MRPS18CQ9Y3D5 142 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 LIPGQ9Y5X9 500 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 DSPPQ9NZW4 1301 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GREB1LQ9C091 1923 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM272A0A1B0GTI8 110 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 FAM166BA8MTA8 275 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 CEBPZOSA8MTT3 80 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 OGG1O15527 345 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 CLDN7O95471 211 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GLB1P16278 677 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 KLK2P20151 261 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 TNFSF4P23510 183 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GPR1P46091 355 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 PNRC1Q12796 327 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GPM6BQ13491 265 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 RSPO2Q6UXX9 243 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 C2orf73Q8N5S3 287 aaPredicted RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 MUCL1Q96DR8 90 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 RCC1LQ96I51 464 aaKnown RBP6.88□□□□□ -1.31
VTI1A-201ENST00000393077 GINS3Q9BRX5 216 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 NMES1Q9C002 83 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 OR51I2Q9H344 312 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 C1orf123Q9NWV4 160 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 C5AR2Q9P296 337 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
VTI1A-201ENST00000393077 SPTBP11277 2137 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 LEFTY2O00292 366 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CYR61O00622 381 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZFPL1O95159 310 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 PI3P19957 117 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 AOAHP28039 575 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MLF1P58340 268 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ACVR1Q04771 509 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MPV17LQ2QL34 196 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF770Q6IQ21 691 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 OLIG3Q7RTU3 272 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 RAB42Q8N4Z0 105 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 OR4D6Q8NGJ1 314 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SMIM14Q96QK8 99 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SMIM7Q9BQ49 75 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MEGF9Q9H1U4 602 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SMDT1Q9H4I9 107 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CXorf36Q9H7Y0 433 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 HCFC1R1Q9NWW0 138 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CKAP5Q14008 2032 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MAP1LC3B2A6NCE7 125 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 H0YIV9 168 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 GNG7O60262 68 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 RAMP1O60894 148 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CSTBP04080 98 aaKnown RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 OR5H8P0DN80 308 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 BRS3P32247 399 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SLC7A9P82251 487 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 RPL24P83731 157 aaKnown RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 NIT1Q86X76 327 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF485Q8NCK3 441 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 KLK6Q92876 244 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MAP1LC3BQ9GZQ8 125 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 HDGFL3Q9Y3E1 203 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 TRAPPC1Q9Y5R8 145 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF780BQ9Y6R6 833 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 PAPPA2Q9BXP8 1791 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MEGF11A6BM72 1044 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 WISP3O95389 354 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 WNT11O96014 354 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CXCL1P09341 107 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 GUCA1AP43080 201 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 GALR1P47211 349 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 GLIPR1P48060 266 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SUCLG1P53597 346 aaKnown RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SELENOTP62341 195 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ELOBQ15370 118 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 DMKNQ6E0U4 476 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 CD300LDQ6UXZ3 194 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZSCAN4Q8NAM6 433 aaPredicted RBP6.87□□□□□ -1.31
VTI1A-201ENST00000393077 ZNF439Q8NDP4 499 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 UBTD2Q8WUN7 234 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SLC25A38Q96DW6 304 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 OR10C1Q96KK4 312 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 PRRX2Q99811 253 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 SLC12A9Q9BXP2 914 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 MSL2Q9HCI7 577 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 A4GALTQ9NPC4 353 aa6.87□□□□□ -1.31
VTI1A-201ENST00000393077 TMEM100Q9NV29 134 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms