RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ICOSLGO75144 302 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 AIFM1O95831 613 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 CRYAAP02489 173 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 FABP3P05413 133 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 VDAC2P45880 294 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 ACTBP60709 375 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 SPCS3P61009 180 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ACTG1P63261 375 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 KIAA0141Q14154 515 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 POU6F1Q14863 301 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 CYP51A1Q16850 503 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 OR2G6Q5TZ20 316 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 LCN12Q6JVE5 192 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 MED27Q6P2C8 311 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 FAM199XQ6PEV8 388 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 OR2L2Q8NH16 312 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 OR9G1Q8NH87 305 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TWIST2Q8WVJ9 160 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RCHY1Q96PM5 261 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 AMBNQ9NP70 447 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TMEM9BQ9NQ34 198 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 BABAM2Q9NXR7 383 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RSL24D1Q9UHA3 163 aaKnown RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 CES1P1Q9UKY3 287 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ARL5AQ9Y689 179 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ANKRD20A5PA0PJZ0 165 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ERVV-1B6SEH8 477 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 MGST3O14880 152 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ACTL6AO96019 429 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GLUD1P00367 558 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GP1BAP07359 652 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PRSS1P07477 247 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 CD99P14209 185 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GM2AP17900 193 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GALR1P47211 349 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 BIKQ13323 160 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ZNF169Q14929 603 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 C5orf64Q2M2E5 130 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TNFAIP8L3Q5GJ75 292 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 FAM27D1Q5T7N8 215 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 LACC1Q8IV20 430 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 SMIM12Q96EX1 92 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ZNF488Q96MN9 340 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PCBD2Q9H0N5 130 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TXNIPQ9H3M7 391 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PLAC1Q9HBJ0 212 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RGS18Q9NS28 235 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ABCC13Q9NSE7 274 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 DMAC2Q9NW81 257 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 BTNL2Q9UIR0 455 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ZNF223Q9UK11 482 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 RPL26L1Q9UNX3 145 aaKnown RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 RFX7Q2KHR2 1363 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 YTHDC2Q9H6S0 1430 aaKnown RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 CSMD1Q96PZ7 3565 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RGPD2P0DJD1 1756 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 N4BP2Q86UW6 1770 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 OTOL1A6NHN0 477 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 TMEM238C9JI98 176 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 XPNPEP2O43895 674 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 LIMS3P0CW19 117 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 LIMS4P0CW20 117 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 FCGR2CP31995 323 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 P2RY2P41231 377 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PSMB2P49721 201 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RIDAP52758 137 aaKnown RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 ACVR1Q04771 509 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PARP15Q460N3 678 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ZNF672Q499Z4 452 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 GSG1LQ6UXU4 331 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 THOC6Q86W42 341 aaKnown RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 APRG1Q8IVJ8 170 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 HSD17B11Q8NBQ5 300 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GPR26Q8NDV2 337 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 OR2L5Q8NG80 312 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 OR4C6Q8NH72 309 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ACTRT1Q8TDG2 376 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 DNASE2BQ8WZ79 361 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 NR4A3Q92570 626 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GMPPAQ96IJ6 420 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 NICN1Q9BSH3 213 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GATA5Q9BWX5 397 aaPredicted RBP3.03□□□□□ -1.92
XRN1-202ENST00000392981 SLC25A31Q9H0C2 315 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 FKRPQ9H9S5 495 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 GOLGA2P5Q9HBQ8 144 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ZNF222Q9UK12 451 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ADGRA3Q8IWK6 1321 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 NRCAMQ92823 1304 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 CNTNAP2Q9UHC6 1331 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PNPLA6Q8IY17 1366 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 ALS2Q96Q42 1657 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 PEAK1Q9H792 1746 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 BOD1L1Q8NFC6 3051 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TRGV8A0A0C4DH27 118 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 DISC1C4P0D8 188 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 TM9SF1O15321 606 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 CTSVO60911 334 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 RP2O75695 350 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 IGHV4-30-4P0DP06 118 aa3.03□□□□□ -1.92
XRN1-202ENST00000392981 NR4A1P22736 598 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms