RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 OR5M9Q8NGP3 310 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 ITPKCQ96DU7 683 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 AUNIPQ9H7T9 357 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 B3GNT2Q9NY97 397 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 FBLN5Q9UBX5 448 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 LHX6Q9UPM6 363 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 PIGLQ9Y2B2 252 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 RBMX2Q9Y388 322 aaKnown RBP9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 CACNG2Q9Y698 323 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 CACNA1GO43497 2377 aa9.96□□□□□ -0.81
SMARCAL1-203ENST00000392128 A0A0A6YYH2 397 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNF503-AS2A6NEH8 195 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 A6NJ64 397 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 CNOT4O95628 575 aaKnown RBP9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 PRF1P14222 555 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAHP16930 419 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 GPR176Q14439 515 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR2A2Q6IF42 318 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR2AE1Q8NHA4 323 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 FCAMRQ8WWV6 532 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 BCL2L2Q92843 193 aaPredicted RBP9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 PHF21AQ96BD5 680 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 C7orf50Q9BRJ6 194 aaKnown RBP9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 ATG5Q9H1Y0 275 aa9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 URB1O60287 2271 aaKnown RBP9.96□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM240BA0A1B0GVZ2 78 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 K7ENP7 123 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 ZNHIT1O43257 154 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 XRCC2O43543 280 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 ORC5O43913 435 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 HCKP08631 526 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 GDNFP39905 211 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 SRP9P49458 86 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 QRFPP83859 136 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 DYRK1AQ13627 763 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 KLF9Q13886 244 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 RNASE12Q5GAN4 147 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 INO80CQ6PI98 192 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 KRT74Q7RTS7 529 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 C9orf106Q8NAJ2 232 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR52I2Q8NH67 350 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 SPSB4Q96A44 273 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 NEURL2Q9BR09 285 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 MMP28Q9H239 520 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 NOX3Q9HBY0 568 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 RAB22AQ9UL26 194 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 LOC100509620A0A075B734 347 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 CD79AP11912 226 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 SLC6A1P30531 599 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 RAB1AP62820 205 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 RIPPLY1Q0D2K3 151 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 SF3B4Q15427 424 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 PLEKHN1Q494U1 663 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 NSUN5P2Q63ZY6 315 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 PLET1Q6UQ28 207 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 ANGPTL5Q86XS5 388 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 GCNT2Q8N0V5 402 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 NANOS1Q8WY41 292 aaKnown RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 AKAP1Q92667 903 aaKnown RBP eCLIP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 GCDHQ92947 438 aaPredicted RBP9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 GPR137Q96N19 417 aa9.95□□□□□ -0.82
SMARCAL1-203ENST00000392128 APC2O95996 2303 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 hCG_38984A0A1B0GV85 526 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 CENPXA8MT69 81 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 KDM4BO94953 1096 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 ECDO95905 644 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 VSIG8P0DPA2 414 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 EDN3P14138 238 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 S100A1P23297 94 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 ACKR3P25106 362 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 STOMP27105 288 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 BTCP35070 178 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 PMPCAQ10713 525 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 TNK1Q13470 666 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 AWAT2Q6E213 333 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 MTFR2Q6P444 385 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 PAQR4Q8N4S7 273 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR6K3Q8NGY3 331 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 CHAC2Q8WUX2 184 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 ABHD17AQ96GS6 310 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 PRRC2CQ9Y520 2896 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 SPTBN2O15020 2390 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 TRAV18A0A075B6X5 111 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 TMEM14DPA8MWL7 114 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 RRP8O43159 456 aaKnown RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 KIR2DL2P43627 348 aaPredicted RBP9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 AP3S2P59780 193 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 FAM3AP98173 230 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 TGFBR3Q03167 851 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 PLP2Q04941 152 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 GTF3C1Q12789 2109 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 UNC119Q13432 240 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR8B8Q15620 311 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 GSG1Q2KHT4 349 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 TBRG1Q3YBR2 411 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 HIKESHIQ53FT3 197 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 Q6ZT83 130 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 OR2W3Q7Z3T1 314 aa9.94□□□□□ -0.82
SMARCAL1-203ENST00000392128 RNF144BQ7Z419 303 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms