RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 SPACA9Q96E40 222 aaPredicted RBP8.57□□□□□ -1.04
COL6A3-204ENST00000392003 BSCL2Q96G97 398 aaPredicted RBP8.57□□□□□ -1.04
COL6A3-204ENST00000392003 SFXN2Q96NB2 322 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 GSX2Q9BZM3 304 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 G6PC2Q9NQR9 355 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 RNF24Q9Y225 148 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 FER1L5A0AVI2 2057 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 A0A1W2PNV4 684 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 ADAM10O14672 748 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 AMY2AP04746 511 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 GABRA1P14867 456 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF43P17038 809 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 SFTPDP35247 375 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 MECP2P51608 486 aaKnown RBP8.57□□□□□ -1.04
COL6A3-204ENST00000392003 PCK2Q16822 640 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF584Q8IVC4 421 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 BMPERQ8N8U9 685 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 DTWD2Q8NBA8 298 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM229BQ8NBD8 167 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 OR5T2Q8NGG2 359 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 ELMOD3Q96FG2 381 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 DMRTA2Q96SC8 542 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 ARRDC1-AS1Q9H2J1 176 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 NXT1Q9UKK6 140 aaKnown RBP8.57□□□□□ -1.04
COL6A3-204ENST00000392003 RAB22AQ9UL26 194 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 KIF26BQ2KJY2 2108 aa8.57□□□□□ -1.04
COL6A3-204ENST00000392003 C9orf170A2RU37 121 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF736B4DX44 427 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 D6RAR5 112 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SIX6O95475 246 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CRYBA1P05813 215 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 ERCC1P07992 297 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CCL4P13236 92 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 FKBP2P26885 142 aaKnown RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 PMPCAQ10713 525 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OPCMLQ14982 345 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SLC25A53Q5H9E4 307 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CARD17Q5XLA6 110 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 TCEAL6Q6IPX3 200 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR52B4Q8NGK2 314 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR5D14Q8NGL3 314 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SLC25A28Q96A46 364 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 MRPS18BQ9Y676 258 aaKnown RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 IGKV1D-43A0A0B4J1Z2 117 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 A0A1W2PNR3 127 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 BTBD17A6NE02 478 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 A8MXK9 166 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 B4E171 279 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 F5H5P2 479 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 DIRAS3O95661 229 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 IL11RAQ14626 422 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 C1orf100Q5SVJ3 147 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SLC22A24Q8N4F4 322 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 NOXO1Q8NFA2 376 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR5M1Q8NGP8 315 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 GLYATL2Q8WU03 294 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CPNE4Q96A23 557 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SLC25A21Q9BQT8 299 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 PBOV1Q9GZY1 135 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 DISC1C4P0D8 188 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 KRBOX1C9JBD0 128 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 M0R296 226 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SULT2B1O00204 365 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 GOSR2O14653 212 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 GDF9O60383 454 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SRSF10O75494 262 aaKnown RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SCGNO76038 276 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CYC1P08574 325 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 NFYAP23511 347 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 PRKXP51817 358 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM176BQ3YBM2 270 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR10K2Q6IF99 312 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 TMED4Q7Z7H5 227 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CLEC1AQ8NC01 280 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 ACBD4Q8NC06 268 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 ADPRHL1Q8NDY3 354 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR2M3Q8NG83 312 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OR2AK2Q8NG84 335 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 SEH1LQ96EE3 360 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 OXGR1Q96P68 337 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 RASL10BQ96S79 203 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 CA10Q9NS85 328 aa8.56□□□□□ -1.04
COL6A3-204ENST00000392003 GDF2Q9UK05 429 aaPredicted RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 FARSAQ9Y285 508 aaKnown RBP8.56□□□□□ -1.04
COL6A3-204ENST00000392003 IGLV3-32A0A0A0MS00 114 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 ZNF878C9JN71 531 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 RAB6AP20340 208 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 RFC3P40938 356 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 OPN5Q6U736 354 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 TMEM156Q8N614 296 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 PTX4Q96A99 478 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 NKX6-2Q9C056 277 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 MOB1AQ9H8S9 216 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 AKIRIN1Q9H9L7 192 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 SEBOXQ9HB31 216 aaPredicted RBP8.55□□□□□ -1.04
COL6A3-204ENST00000392003 TREM2Q9NZC2 230 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 HDGFL3Q9Y3E1 203 aa8.55□□□□□ -1.04
COL6A3-204ENST00000392003 RALGAPA1Q6GYQ0 2036 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 317.1 ms