RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 RAB32Q13637 225 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 DUSP18Q8NEJ0 188 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 DDX60Q8IY21 1712 aaKnown RBP14.62□□□□□ -0.07
SHANK1-204ENST00000391814 HMSDA8MTL9 139 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 FXYD1O00168 92 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 KLK8O60259 260 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 CT45A10P0DMU9 189 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 NID1P14543 1247 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 BMP5P22003 454 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 RPL24P83731 157 aaKnown RBP14.62□□□□□ -0.07
SHANK1-204ENST00000391814 OR5I1Q13606 314 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 DHRS11Q6UWP2 260 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 RTN4IP1Q8WWV3 396 aaPredicted RBP14.62□□□□□ -0.07
SHANK1-204ENST00000391814 ARRDC3Q96B67 414 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 C19orf43Q9BQ61 176 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 IGHV3-64DA0A0J9YX35 117 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 FCN1O00602 326 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 SPRY1O43609 319 aaPredicted RBP14.62□□□□□ -0.07
SHANK1-204ENST00000391814 CNIH1O95406 144 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 CTSAP10619 480 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 HOXC13P31276 330 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 DHRS2Q13268 280 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 ZNF687Q8N1G0 1237 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 RHBDD1Q8TEB9 315 aa14.62□□□□□ -0.07
SHANK1-204ENST00000391814 COL14A1Q05707 1796 aaKnown RBP14.62□□□□□ -0.07
SHANK1-204ENST00000391814 CLEC18AA5D8T8 446 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ELAVL1Q15717 326 aaKnown RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 CLEC18CQ8NCF0 446 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 S1PR5Q9H228 398 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 PCDHGA9Q9Y5G4 932 aaKnown RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ZNF732B4DXR9 585 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 SFT2D2O95562 160 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 MPC2O95563 127 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 FFAR4Q5NUL3 377 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 CDC20BQ86Y33 519 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 APH1AQ96BI3 265 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 RIMS4Q9H426 269 aaPredicted RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ZBTB42B2RXF5 422 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 CD1CP29017 333 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 NHLH1Q02575 133 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 NHLH2Q02577 135 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ZDHHC22Q8N966 263 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 NUBPLQ8TB37 319 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 IFI44Q8TCB0 444 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 MS4A6EQ96DS6 147 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ADAT1Q9BUB4 502 aaKnown RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 SLC46A2Q9BY10 475 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 BARX1Q9HBU1 254 aaPredicted RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 SLC5A6Q9Y289 635 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 CSN1S1P47710 185 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 RAB7AP51149 207 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 HTRA3P83110 453 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 PINX1Q96BK5 328 aaKnown RBP14.61□□□□□ -0.07
SHANK1-204ENST00000391814 NRSN2Q9GZP1 204 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 VN1R1Q9GZP7 353 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 DUSP13Q9UII6 198 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 ZNF835Q9Y2P0 537 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 M1APQ8TC57 530 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 B3GAT1Q9P2W7 334 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 WDR1O75083 606 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 CALHM3Q86XJ0 350 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 PIAS3Q9Y6X2 628 aa14.61□□□□□ -0.07
SHANK1-204ENST00000391814 A0A1B0GUL6 1792 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 ABCD4O14678 606 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 ETHE1O95571 254 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 OR11L1Q8NGX0 322 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 ZC3HAV1LQ96H79 300 aaKnown RBP14.6□□□□□ -0.07
SHANK1-204ENST00000391814 PRR13Q9NZ81 148 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 AGFG1P52594 562 aaKnown RBP14.6□□□□□ -0.07
SHANK1-204ENST00000391814 DLK1P80370 383 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 CLN3Q13286 438 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 C12orf49Q9H741 205 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 IGHV3-9P01782 118 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 TCN2P20062 427 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 INPP5JQ15735 1006 aaPredicted RBP14.6□□□□□ -0.07
SHANK1-204ENST00000391814 GOT1L1Q8NHS2 421 aaPredicted RBP14.6□□□□□ -0.07
SHANK1-204ENST00000391814 GPR137Q96N19 417 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 TRIB1Q96RU8 372 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 DECR2Q9NUI1 292 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 GPR12P47775 334 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 ZNF296Q8WUU4 475 aaPredicted RBP14.6□□□□□ -0.07
SHANK1-204ENST00000391814 A4GNTQ9UNA3 340 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 CYBAP13498 195 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 ABLIM2Q6H8Q1 611 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 OR10G3Q8NGC4 313 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 FAM174AQ8TBP5 190 aa14.6□□□□□ -0.07
SHANK1-204ENST00000391814 PRSS37A4D1T9 235 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 K7ESM1 405 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 TNFRSF10CO14798 259 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 SIGLEC5O15389 551 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 TMPRSS11DO60235 418 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 FCMRO60667 390 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 SUB1P53999 127 aaKnown RBP eCLIP14.59□□□□□ -0.07
SHANK1-204ENST00000391814 HLA-DRB3P79483 266 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 SIGLEC14Q08ET2 396 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 SLC39A5Q6ZMH5 540 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 OR10C1Q96KK4 312 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 MYO18AQ92614 2054 aaKnown RBP14.59□□□□□ -0.07
SHANK1-204ENST00000391814 GPANK1O95872 356 aa14.59□□□□□ -0.07
SHANK1-204ENST00000391814 F12P00748 615 aaPredicted RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms