RNA–Protein interactions for RNA: ENST00000390485.1

TRAJ53-201, Transcript of T cell receptor alpha joining 53, humanhuman

APPRIS P1 BASIC

Gene TRAJ53, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ53-201ENST00000390485 FAM213AQ9BRX8 229 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 RDH14Q9HBH5 336 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 TMEM27Q9HBJ8 222 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 PFDN4Q9NQP4 134 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 HOMER3Q9NSC5 361 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 TAS2R9Q9NYW1 312 aa-1.98□□□□□ -2.73
TRAJ53-201ENST00000390485 LAMA2P24043 3122 aaKnown RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 COL18A1P39060 1754 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 IGHV1-69DA0A0B4J2H0 117 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 HSD17B6O14756 317 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 NCR3O14931 201 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 OXSR1O95747 527 aaPredicted RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 MT-CO2P00403 227 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 FGF1P05230 155 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 RPSAP08865 295 aaKnown RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 AREGP15514 252 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 SLC2A5P22732 501 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 CD70P32970 193 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 RBM34P42696 430 aaKnown RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 RGS6P49758 472 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 HINT1P49773 126 aaPredicted RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 AP3M2P53677 418 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 CLNS1AP54105 237 aaKnown RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 VSX2P58304 361 aaPredicted RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 MXD1Q05195 221 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 OR5I1Q13606 314 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 NCF4Q15080 339 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 KCTD21Q4G0X4 260 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 TUSC5Q8IXB3 177 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 C11orf72Q8NBR9 251 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 OR10R2Q8NGX6 335 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 ENKURQ8TC29 256 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 PINX1Q96BK5 328 aaKnown RBP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 CNDP1Q96KN2 507 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 PRRC1Q96M27 445 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 FTHL17Q9BXU8 183 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 POTEKPQ9BYX7 375 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 CCDC68Q9H2F9 335 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 C8orf4Q9NR00 106 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 SLC7A8Q9UHI5 535 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 GTF2A1LQ9UNN4 478 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 ST3GAL6Q9Y274 331 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 PUS1Q9Y606 427 aaKnown RBP eCLIP-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 MINOS1-NBL1R4GNA1 71 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 AKAP6Q13023 2319 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 ZNF532Q9HCE3 1301 aa-1.99□□□□□ -2.73
TRAJ53-201ENST00000390485 CUX2O14529 1486 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 LOC110117498A0A087WWA1 95 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 IGKV1-12A0A0C4DH73 117 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 TCRBV9S1A1TA0A576 114 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 OR5B21A6NL26 309 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 GYG2O15488 501 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 PSIP1O75475 530 aaKnown RBP-2□□□□□ -2.73
TRAJ53-201ENST00000390485 BCAS2O75934 225 aaPredicted RBP-2□□□□□ -2.73
TRAJ53-201ENST00000390485 IGKV1D-12P01611 117 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 ESDP10768 282 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 SERPINB8P50452 374 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 RAD23AP54725 363 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 QRFPP83859 136 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 ZMYND11Q15326 602 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 LINC01620Q4KN68 170 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 TP53I3Q53FA7 332 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 TPGS2Q68CL5 300 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 CD300LGQ6UXG3 332 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 CLYBLQ8N0X4 340 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 OR2K2Q8NGT1 345 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 LHFPL5Q8TAF8 219 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 TAMM41Q96BW9 452 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 KCNS1Q96KK3 526 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 CAPZA3Q96KX2 299 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 Q96MT0 163 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 VSTM2LQ96N03 204 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 RAB3IPQ96QF0 476 aaPredicted RBP-2□□□□□ -2.73
TRAJ53-201ENST00000390485 OR4K3Q96R72 315 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 ZNF426Q9BUY5 554 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 EDEM3Q9BZQ6 932 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 NXF5Q9H1B4 397 aaKnown RBP-2□□□□□ -2.73
TRAJ53-201ENST00000390485 MFSD1Q9H3U5 465 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 COPS7BQ9H9Q2 264 aaPredicted RBP-2□□□□□ -2.73
TRAJ53-201ENST00000390485 TMEM38BQ9NVV0 291 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 RDH8Q9NYR8 311 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 LAMP5Q9UJQ1 280 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 ZFP30Q9Y2G7 519 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 KCNE3Q9Y6H6 103 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 MCM3APO60318 1980 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 MROH7Q68CQ1 1323 aa-2□□□□□ -2.73
TRAJ53-201ENST00000390485 EML6Q6ZMW3 1958 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 CSMD3Q7Z407 3707 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 IGHV3-64A0A075B6Q5 118 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 IGHV3-21A0A0B4J1V1 117 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 LINC00854A0A1B0GVQ3 168 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 A0A1W2PNV4 684 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 H0Y626 953 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 NMT2O60551 498 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 OR4F21O95013 312 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 LRATO95237 230 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 PSKH1P11801 424 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 TALDO1P37837 337 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 P2RY2P41231 377 aa-2.01□□□□□ -2.73
TRAJ53-201ENST00000390485 ATP5G2Q06055 141 aa-2.01□□□□□ -2.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms