RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 PEBP1P30086 187 aaKnown RBP11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 CDAP32320 146 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NKX2-1P43699 371 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NPBWR1P48145 328 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TESK1Q15569 626 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PRSS54Q6PEW0 395 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 DOK3Q7L591 496 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF784Q8NCA9 323 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 C11orf40Q8WZ69 217 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TLNRD1Q9H1K6 362 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NKX2-4Q9H2Z4 354 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 CHST11Q9NPF2 352 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIPOXQ9P0Z9 390 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NSG2Q9Y328 171 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 LINC01553A4QN01 128 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 ADRA2CP18825 462 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PTGFRP43088 359 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF117Q03924 483 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 ADIRFQ15847 76 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TMEM196Q5HYL7 178 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 LDLRAD3Q86YD5 345 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 SLC38A9Q8NBW4 561 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TMEM104Q8NE00 496 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 HPSE2Q8WWQ2 592 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 RTN4IP1Q8WWV3 396 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PBX4Q9BYU1 374 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 HEXA-AS1Q9H8Q6 139 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PLEKHA2Q9HB19 425 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 FBXL17Q9UF56 701 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TBX21Q9UL17 535 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 VSIG4Q9Y279 399 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 TMEM184BQ9Y519 407 aaPredicted RBP11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 SFT2D2O95562 160 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 HBE1P02100 147 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 FASLGP48023 281 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PLP2Q04941 152 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 OR10D4PQ8NGN7 298 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 NINJ1Q92982 152 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PIK3IP1Q96FE7 263 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 FAM60AQ9NP50 221 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 GNG13Q9P2W3 67 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 MMACHCQ9Y4U1 282 aa11.78□□□□□ -0.52
TRAPPC9-201ENST00000389328 PLRG1O43660 514 aaKnown RBP11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 SCGB1D1O95968 90 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 GUSBP08236 651 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 QDPRP09417 244 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 DRD1P21728 446 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 DUSP1P28562 367 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 TOMM34Q15785 309 aaPredicted RBP11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 ZNF141Q15928 474 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 AWAT1Q58HT5 328 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 SHEQ5VZ18 495 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 SLC25A42Q86VD7 318 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 LRRC3BQ96PB8 259 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 SEC11CQ9BY50 192 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 RAB18Q9NP72 206 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 LPAR3Q9UBY5 353 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 RARRES3Q9UL19 164 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 DTX4Q9Y2E6 619 aa11.77□□□□□ -0.52
TRAPPC9-201ENST00000389328 OTOL1A6NHN0 477 aaPredicted RBP11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 SCAF4O95104 1147 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 NGFRP08138 427 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 LAP3P28838 519 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 TNFRSF4P43489 277 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 HTR5AP47898 357 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 ARTNQ5T4W7 220 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 ASB5Q8WWX0 329 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 MRPL22Q9NWU5 206 aaKnown RBP11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 SHISA8B8ZZ34 492 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 GAS1P54826 345 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 GFERP55789 205 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 C9orf135Q5VTT2 229 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 CLEC18BQ6UXF7 455 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 SDSLQ96GA7 329 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF251Q9BRH9 671 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 PLXNA1Q9UIW2 1896 aa11.77□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZIC2O95409 532 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 LCN15Q6UWW0 184 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ANKRD9Q96BM1 317 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 GOLGB1Q14789 3259 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 PLXNB2O15031 1838 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 CEBPZOSA8MTT3 80 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 PHOX2AO14813 284 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 HIST1H1DP16402 221 aaKnown RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 TMEM268Q5VZI3 342 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 AMELYQ99218 206 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ALX4Q9H161 411 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 FGF21Q9NSA1 209 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 C19orf12Q9NSK7 152 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 GREB1Q4ZG55 1949 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 A8MXK9 166 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 CFIP05156 583 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 TMEM33P57088 247 aa11.76□□□□□ -0.53
TRAPPC9-201ENST00000389328 OR2T2Q6IF00 324 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms