RNA–Protein interactions for RNA: ENST00000381551.8

PDGFB-202, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 5 BASIC

Gene PDGFB, Length 1,125 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-202ENST00000381551 ACSM1Q08AH1 577 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 SPHARQ15513 63 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 OR8B8Q15620 311 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 Q6ZR03 302 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 Q6ZSR3 168 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 OR5AS1Q8N127 324 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 NINJ1Q92982 152 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 OR5M11Q96RB7 305 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 SLC30A2Q9BRI3 323 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 CXorf56Q9H5V9 222 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 MSL2Q9HCI7 577 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 DYNLRB1Q9NP97 96 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 TRIM36Q9NQ86 728 aa13.19□□□□□ -0.3
PDGFB-202ENST00000381551 ZNF701Q9NV72 531 aaPredicted RBP13.19□□□□□ -0.3
PDGFB-202ENST00000381551 CSMD2Q7Z408 3487 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 A0A1B0GWJ7 208 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ZSCAN5BA6NJL1 495 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 C17orf100A8MU93 164 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ZFPL1O95159 310 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 UBCP0CG48 685 aaKnown RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ATP6V1B1P15313 513 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ACKR3P25106 362 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 MAP2K3P46734 347 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ZNF81P51508 661 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 CDH15P55291 814 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 EMX1Q04741 257 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 KCTD21Q4G0X4 260 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 TMEM244Q5VVB8 128 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 DMKNQ6E0U4 476 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 DOK3Q7L591 496 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 KRT74Q7RTS7 529 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 SPARTQ8N0X7 666 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 BHLHE23Q8NDY6 225 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 CSNK2A3Q8NEV1 391 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 OR14K1Q8NGZ2 314 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 OR13G1Q8NGZ3 307 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 RPS4Y2Q8TD47 263 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 GTF3AQ92664 365 aaKnown RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 MBD6Q96DN6 1003 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 FAM71F1Q96KD3 344 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 VRK1Q99986 396 aaPredicted RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 TMEM100Q9NV29 134 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 MRPL15Q9P015 296 aaKnown RBP13.18□□□□□ -0.3
PDGFB-202ENST00000381551 ZDHHC8Q9ULC8 765 aa13.18□□□□□ -0.3
PDGFB-202ENST00000381551 USF3Q68DE3 2245 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 TMEM212A6NML5 194 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 SYT7O43581 403 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 MTRF1O75570 445 aaKnown RBP13.17□□□□□ -0.3
PDGFB-202ENST00000381551 DHRS3O75911 302 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 IGHV1-46P01743 117 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 ADH4P08319 380 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 RIPPLY1Q0D2K3 151 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 CDK5R1Q15078 307 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 MED22Q15528 200 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 CDH24Q86UP0 819 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 COMMD2Q86X83 199 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 ZNF676Q8N7Q3 588 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 CCDC54Q8NEL0 328 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 SEMA6DQ8NFY4 1073 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 OR5AK2Q8NH90 309 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 PDCD1LG2Q9BQ51 273 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 RAB1BQ9H0U4 201 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 ACOT13Q9NPJ3 140 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 BEX4Q9NWD9 120 aaPredicted RBP13.17□□□□□ -0.3
PDGFB-202ENST00000381551 RHBDD3Q9Y3P4 386 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 V9GYS6 101 aa13.17□□□□□ -0.3
PDGFB-202ENST00000381551 A0A1B0GVI7 797 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 SPRY3O43610 288 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 PLPP2O43688 288 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 NDUFS7O75251 213 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 CST4P01036 141 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 RPSAP08865 295 aaKnown RBP13.16□□□□□ -0.3
PDGFB-202ENST00000381551 CA6P23280 308 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 TAS2R43P59537 309 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 BDH1Q02338 343 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
PDGFB-202ENST00000381551 DEFB113Q30KQ7 82 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 ZMAT1Q5H9K5 638 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 ZNF773Q6PK81 442 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 ZFP41Q8N8Y5 198 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 GHSRQ92847 366 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 SMIM19Q96E16 107 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
PDGFB-202ENST00000381551 DIRC2Q96SL1 478 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 GSX2Q9BZM3 304 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 SLC22A4Q9H015 551 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 TPK1Q9H3S4 243 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 NKIRAS2Q9NYR9 191 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 HHLA2Q9UM44 414 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 PIGLQ9Y2B2 252 aa13.16□□□□□ -0.3
PDGFB-202ENST00000381551 LOC107986453A0A1B0GWG9 222 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 DHRS7CA6NNS2 312 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 ANKRD30BLA7E2S9 258 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 H0YL77 283 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 H3BSH0 61 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 MLNRO43193 412 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 GMDSO60547 372 aa13.15□□□□□ -0.3
PDGFB-202ENST00000381551 F12P00748 615 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms