RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 LIPGQ9Y5X9 500 aa16.93■□□□□ 0.3
SMARCD1-201ENST00000381513 TLCD2A6NGC4 264 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 CDRT15L2A8MXV6 281 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 JMJD7P0C870 316 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 EGR3Q06889 387 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 DMWDQ09019 674 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 SLC8B1Q6J4K2 584 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 PEG10Q86TG7 708 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 TMEFF1Q8IYR6 380 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 CYB561D1Q8N8Q1 229 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 CDRT4Q8N9R6 151 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 IL18BPO95998 194 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 MRPL41Q8IXM3 137 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 LFNGQ8NES3 379 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 MENTQ9BUN1 341 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 NUP210Q8TEM1 1887 aaPredicted RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 CACNA1IQ9P0X4 2223 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 MEGF11A6BM72 1044 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 RENP00797 406 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 ZNF888P0CJ79 500 aaPredicted RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 CXCR1P25024 350 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 ALDH3B1P43353 468 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 MFGE8Q08431 387 aaPredicted RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 SLC17A1Q14916 467 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 ZIC1Q15915 447 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 FAM110CQ1W6H9 321 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 OR5H2Q8NGV7 314 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 METTL21AQ8WXB1 218 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 RSPRY1Q96DX4 576 aa16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 MRPL22Q9NWU5 206 aaKnown RBP16.92■□□□□ 0.3
SMARCD1-201ENST00000381513 NUDT21O43809 227 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ABLIM3O94929 683 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 RPLP1P05386 114 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 OR4A8P0C604 315 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 CPMP14384 443 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 TUBG1P23258 451 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 PAX5Q02548 391 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ARFRP1Q13795 201 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 TWSG1Q9GZX9 223 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 LANCL2Q9NS86 450 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 COLEC10Q9Y6Z7 277 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 BRCA2P51587 3418 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 FTCDNL1E5RQL4 147 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 IFNA21P01568 189 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 NNATQ16517 81 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 HIKESHIQ53FT3 197 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 TMEM156Q8N614 296 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 SCGB3A2Q96PL1 93 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ST6GALNAC5Q9BVH7 336 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 CNTD2Q9H8S5 307 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 DNAJB12Q9NXW2 375 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 STRAPQ9Y3F4 350 aaKnown RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 INSL5Q9Y5Q6 135 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 KLF8O95600 359 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ASGR1P07306 291 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 AMY2BP19961 511 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 GLIPR1P48060 266 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 AADACL3Q5VUY0 350 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ETFRF1Q6IPR1 90 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 TMEM183AQ8IXX5 376 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 FAM185AQ8N0U4 392 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 ZFP62Q8NB50 900 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 POC1BQ8TC44 478 aa16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 FOXD3Q9UJU5 478 aaPredicted RBP16.91■□□□□ 0.3
SMARCD1-201ENST00000381513 LMX1BO60663 402 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 DIRAS3O95661 229 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 SCGB1D1O95968 90 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 RND3P61587 244 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 HERPUD1Q15011 391 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 ARSJQ5FYB0 599 aaPredicted RBP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 THEM4Q5T1C6 240 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 PTCRAQ6ISU1 281 aaPredicted RBP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 NRSN1Q8IZ57 195 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 CUTCQ9NTM9 273 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 C19orf53Q9UNZ5 99 aaPredicted RBP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 Q9Y3F1 56 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 TCF21O43680 179 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 DUSP11O75319 330 aaKnown RBP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 PNLIPP16233 465 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 AKT2P31751 481 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 SLC25A1P53007 311 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 EMP2P54851 167 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 TRA2AQ13595 282 aaKnown RBP eCLIP16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 TCEA2Q15560 299 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 ZNF880Q6PDB4 577 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 SGPP2Q8IWX5 399 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 GATSQ8NAP1 163 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 SHDQ96IW2 340 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 GPR34Q9UPC5 381 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 WSB1Q9Y6I7 421 aa16.9■□□□□ 0.3
SMARCD1-201ENST00000381513 MTCL1Q9Y4B5 1905 aaKnown RBP16.89■□□□□ 0.3
SMARCD1-201ENST00000381513 A6NIZ1 184 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 MASP2O00187 686 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 OR3A1P47881 315 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 LBX1P52954 281 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 RAP1BP61224 184 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 HNF4GQ14541 408 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 TPGS2Q68CL5 300 aa16.89■□□□□ 0.29
SMARCD1-201ENST00000381513 SMARCD2Q92925 531 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms