RNA–Protein interactions for RNA: ENST00000381342.6

SNRPB-201, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SNRPB, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-201ENST00000381342 ZNF19P17023 458 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 MYF6P23409 242 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 CFL1P23528 166 aaKnown RBP13.72□□□□□ -0.21
SNRPB-201ENST00000381342 GSK3AP49840 483 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 OR12D2P58182 307 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 TNFAIP6P98066 277 aaPredicted RBP13.72□□□□□ -0.21
SNRPB-201ENST00000381342 HNRNPA0Q13151 305 aaKnown RBP13.72□□□□□ -0.21
SNRPB-201ENST00000381342 GALEQ14376 348 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 FAM209AQ5JX71 171 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 BPIFB6Q8NFQ5 453 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 OR51E1Q8TCB6 317 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 UBASH3BQ8TF42 649 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 YIPF5Q969M3 257 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 RNF166Q96A37 237 aaPredicted RBP13.72□□□□□ -0.21
SNRPB-201ENST00000381342 C4orf36Q96KX1 117 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 DIRC2Q96SL1 478 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF649Q9BS31 505 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 PIMREGQ9BSJ6 248 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 ADAT1Q9BUB4 502 aaKnown RBP13.72□□□□□ -0.21
SNRPB-201ENST00000381342 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 DECR2Q9NUI1 292 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 SNX5Q9Y5X3 404 aa13.72□□□□□ -0.21
SNRPB-201ENST00000381342 CR1P17927 2039 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 IRGMA1A4Y4 181 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 INAFM1C9JVW0 142 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 CDC14BO60729 498 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 CD55P08174 381 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 LIMS3P0CW19 117 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 LIMS4P0CW20 117 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 CA6P23280 308 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 TNFSF4P23510 183 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ACKR3P25106 362 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ETV1P50549 477 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 OR8B8Q15620 311 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ODF4Q2M2E3 257 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 WDR38Q5JTN6 314 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 AHSA2Q719I0 299 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF540Q8NDQ6 660 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 OR13G1Q8NGZ3 307 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 C10orf105Q8TEF2 133 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ITLN1Q8WWA0 313 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 GGHQ92820 318 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 PELI1Q96FA3 418 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 MRPL48Q96GC5 212 aaKnown RBP13.71□□□□□ -0.21
SNRPB-201ENST00000381342 FAM71F1Q96KD3 344 aaPredicted RBP13.71□□□□□ -0.21
SNRPB-201ENST00000381342 JAM3Q9BX67 310 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ISG20L2Q9H9L3 353 aaKnown RBP13.71□□□□□ -0.21
SNRPB-201ENST00000381342 GPR84Q9NQS5 396 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 TMEM100Q9NV29 134 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 ZNF391Q9UJN7 358 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.21
SNRPB-201ENST00000381342 CACNG2Q9Y698 323 aa13.71□□□□□ -0.21
SNRPB-201ENST00000381342 IGHV1-69-2A0A0G2JMI3 117 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 IGHV3-64DA0A0J9YX35 117 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 A0A1B0GWJ7 208 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 LOC390937A0A1W2PQ73 354 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 EFCAB10A6NFE3 127 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 F5H5P2 479 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 SLC1A7O00341 560 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 P2RY10O00398 339 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 CD5LO43866 347 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 IGLV3-1P01715 115 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 PIPP12273 146 aaPredicted RBP13.7□□□□□ -0.22
SNRPB-201ENST00000381342 COL8A2P25067 703 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 KIR3DL2P43630 455 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 MVKQ03426 396 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 LOXL1Q08397 574 aaPredicted RBP13.7□□□□□ -0.22
SNRPB-201ENST00000381342 OR8G1Q15617 311 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 ELMOD2Q8IZ81 293 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 ZNF786Q8N393 782 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 PRSS35Q8N3Z0 413 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 RDH5Q92781 318 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 CNBD2Q96M20 576 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 OR2V2Q96R30 315 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 EGLN1Q9GZT9 426 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 PLCXD1Q9NUJ7 323 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 TREM2Q9NZC2 230 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 CNOT2Q9NZN8 540 aaKnown RBP13.7□□□□□ -0.22
SNRPB-201ENST00000381342 MRPL15Q9P015 296 aaKnown RBP13.7□□□□□ -0.22
SNRPB-201ENST00000381342 PSORS1C1Q9UIG5 152 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 DYSFO75923 2080 aa13.7□□□□□ -0.22
SNRPB-201ENST00000381342 ANKRD30BLA7E2S9 258 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 H3BSH0 61 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 RP2O75695 350 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 TACSTD2P09758 323 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 MYL12AP19105 171 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 USF1P22415 310 aaPredicted RBP13.69□□□□□ -0.22
SNRPB-201ENST00000381342 DCKP27707 260 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 RBMXP38159 391 aaKnown RBP13.69□□□□□ -0.22
SNRPB-201ENST00000381342 DDOSTP39656 456 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 ST3GAL4Q11206 333 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 C6orf141Q5SZD1 244 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 KCTD20Q7Z5Y7 419 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 SYS1Q8N2H4 156 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 TMEM80Q96HE8 168 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 MEGF10Q96KG7 1140 aa13.69□□□□□ -0.22
SNRPB-201ENST00000381342 ZNF184Q99676 751 aaPredicted RBP13.69□□□□□ -0.22
SNRPB-201ENST00000381342 PAPOLGQ9BWT3 736 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms