RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 FREM2Q5SZK8 3169 aa14.4□□□□□ -0.1
NKX3-1-201ENST00000380871 RAB6AP20340 208 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 PSMB6P28072 239 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 CDAP32320 146 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 GFOD2Q3B7J2 385 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 PPP1R3BQ86XI6 285 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 LINC00518Q8N0U6 118 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 GTPBP8Q8N3Z3 284 aaPredicted RBP14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 ZDHHC22Q8N966 263 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 OR4K15Q8NH41 348 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 PHYHIPLQ96FC7 376 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 DEFB126Q9BYW3 111 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 SLC6A15Q9H2J7 730 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 HLA-GP17693 338 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 BIDP55957 195 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 HSF1Q00613 529 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 MAFIPQ8WZ33 124 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 TLNRD1Q9H1K6 362 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 POLR1DQ9Y2S0 133 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 RALGAPA1Q6GYQ0 2036 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 TO15178 435 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 RAD51DO75771 328 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 DUS4LO95620 317 aaKnown RBP14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 MPIG6BO95866 241 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 OR3A4PP47883 348 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 C17orf67Q0P5P2 114 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 MFAP5Q13361 173 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 SLC22A24Q8N4F4 322 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 OR10R2Q8NGX6 335 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 PTX4Q96A99 478 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5B2Q96R09 309 aa14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF107Q9UII5 783 aaPredicted RBP14.39□□□□□ -0.11
NKX3-1-201ENST00000380871 CEP192Q8TEP8 1941 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 MUC3AQ02505 3323 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 CCL4P13236 92 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF93P35789 620 aaPredicted RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 RPL35P42766 123 aaKnown RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 MMP16P51512 607 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF441Q8N8Z8 693 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 OR4A4PQ8NGN8 299 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 OIT3Q8WWZ8 545 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 MR1Q95460 341 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM230Q96A57 120 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5AC2Q9NZP5 309 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 FAM96BQ9Y3D0 163 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 DBX1A6NMT0 343 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 KLK2P20151 261 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF41P51814 821 aaPredicted RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 PCK2Q16822 640 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 CPEB2Q7Z5Q1 589 aaKnown RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF775Q96BV0 537 aaPredicted RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 CPNE2Q96FN4 548 aaPredicted RBP14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 C5orf66Q9H5L9 145 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 ZNF319Q9P2F9 582 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 PRELID3BQ9Y3B1 194 aa14.38□□□□□ -0.11
NKX3-1-201ENST00000380871 VSTM2BA6NLU5 285 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 OR2T1O43869 369 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 HTR3BO95264 441 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 HSD11B1P28845 292 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 AKR1D1P51857 326 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 NKAPLQ5M9Q1 402 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 GLIPR1L1Q6UWM5 242 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 OR51F2Q8NH61 342 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM41AQ96HV5 264 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 LPAR5Q9H1C0 372 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 OR2S2Q9NQN1 319 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 CYTL1Q9NRR1 136 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 HFEQ30201 348 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 H1FNTQ75WM6 255 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 RABEPKQ7Z6M1 372 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 HOGA1Q86XE5 327 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 NFAM1Q8NET5 270 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 OR5D18Q8NGL1 313 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 F8W036 122 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 SDCBPO00560 298 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 EFNA2O43921 213 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 BPNT1O95861 308 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 BLOC1S1P78537 153 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 HAGHLQ6PII5 290 aaPredicted RBP14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 KMT5CQ86Y97 462 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 IFI44Q8TCB0 444 aa14.37□□□□□ -0.11
NKX3-1-201ENST00000380871 C5orf63A6NC05 138 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 DMDP11532 3685 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 NPBWR1P48145 328 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 SCRN3Q0VDG4 424 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 SGCAQ16586 387 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 ABHD12BQ7Z5M8 362 aaPredicted RBP14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 SAP25Q8TEE9 199 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 FAM71F1Q96KD3 344 aaPredicted RBP14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 CYB5R1Q9UHQ9 305 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 TMEM14DPA8MWL7 114 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 FGF16O43320 207 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 AIMP2Q13155 320 aaKnown RBP14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 KLHL24Q6TFL4 600 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 FOXRED2Q8IWF2 684 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 BAP18Q8IXM2 172 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 OR10H5Q8NGA6 315 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 CLDN23Q96B33 292 aa14.36□□□□□ -0.11
NKX3-1-201ENST00000380871 WDR77Q9BQA1 342 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms