RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 SPSB4Q96A44 273 aa20.63■□□□□ 0.89
TNFRSF4-201ENST00000379236 NTN4Q9HB63 628 aa20.63■□□□□ 0.89
TNFRSF4-201ENST00000379236 TRIM36Q9NQ86 728 aa20.63■□□□□ 0.89
TNFRSF4-201ENST00000379236 C1orf123Q9NWV4 160 aa20.63■□□□□ 0.89
TNFRSF4-201ENST00000379236 ANK2Q01484 3957 aa20.63■□□□□ 0.89
TNFRSF4-201ENST00000379236 SELENOFO60613 162 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 FSHBP01225 129 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 GNALP38405 381 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 SNCBQ16143 134 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 SLC35D3Q5M8T2 416 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 FTMTQ8N4E7 242 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 PAPD5Q8NDF8 572 aaKnown RBP20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 OTOSQ8NHW6 89 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 NRBF2Q96F24 287 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 TECTBQ96PL2 329 aa20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 PAPOLBQ9NRJ5 636 aaKnown RBP20.62■□□□□ 0.89
TNFRSF4-201ENST00000379236 IGHV2-70DA0A0C4DH43 119 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 GSC2O15499 205 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 TIPRLO75663 272 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 OPRL1P41146 370 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 NAA10P41227 235 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 FAM3AP98173 230 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 SNAPC1Q16533 368 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 RAB40AQ8WXH6 277 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 SGK3Q96BR1 496 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 AMELYQ99218 206 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 PRRG3Q9BZD7 231 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 SLC25A19Q9HC21 320 aa20.61■□□□□ 0.89
TNFRSF4-201ENST00000379236 TRAV38-1A0A0B4J264 116 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 C3orf80F5H4A9 247 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 LGALS8O00214 317 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 PHYHO14832 338 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 CD80P33681 288 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 TMEM236Q5W0B7 351 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 SFRP4Q6FHJ7 346 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 LYPD2Q6UXB3 125 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 CSNK2A3Q8NEV1 391 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 FAM216AQ8WUB2 273 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 CADM1Q9BY67 442 aaKnown RBP20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 MS4A7Q9GZW8 240 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 RGCCQ9H4X1 137 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 TVP23BQ9NYZ1 205 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 ERVK-18Q9QC07 812 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 LAMP5Q9UJQ1 280 aa20.6■□□□□ 0.89
TNFRSF4-201ENST00000379236 PTBP3O95758 552 aaKnown RBP20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 NPY4RP50391 375 aa20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 PAX8Q06710 450 aa20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 LCN1P1Q5VSP4 162 aa20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 KRT77Q7Z794 578 aa20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 GCDHQ92947 438 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 NUDT16L1Q9BRJ7 211 aaKnown RBP20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 PAPOLGQ9BWT3 736 aaKnown RBP20.59■□□□□ 0.89
TNFRSF4-201ENST00000379236 hCG_38984A0A1B0GV85 526 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 OOEPA6NGQ2 149 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 GSK3AP49840 483 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 CRISP1P54107 249 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 BNIP1Q12981 228 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 APOFQ13790 326 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 WDR25Q64LD2 544 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 PARP8Q8N3A8 854 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 BBS1Q8NFJ9 593 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 OR5K1Q8NHB7 308 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 NIPAL2Q9H841 368 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 ZNF69Q9UC07 566 aa20.58■□□□□ 0.89
TNFRSF4-201ENST00000379236 ANXA2P2A6NMY6 339 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 ADAM20O43506 726 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 NDUFA2O43678 99 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 ATP5HO75947 161 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 PPIAL4GP0DN37 164 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 CD276Q5ZPR3 534 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 ZNF826PQ6ZT77 177 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 SIGLECL1Q8N7X8 197 aa20.57■□□□□ 0.88
TNFRSF4-201ENST00000379236 ENSAO43768 121 aaKnown RBP20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 PSMA6P60900 246 aaKnown RBP20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 KLF17Q5JT82 389 aaPredicted RBP20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 KCTD18Q6PI47 426 aaPredicted RBP20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 PRSS45Q7RTY3 260 aa20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 MICU1Q9BPX6 476 aa20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 KRT84Q9NSB2 600 aa20.56■□□□□ 0.88
TNFRSF4-201ENST00000379236 TRAV40A0A0B4J280 105 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 KIR2DS1A0A191URI9 304 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 MRPL3P09001 348 aaKnown RBP20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 SLC2A5P22732 501 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 PSMB10P40306 273 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 ESRRGP62508 458 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 HOXA4Q00056 320 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 IL5RAQ01344 420 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 PAX2Q02962 417 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 C1orf146Q5VVC0 180 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 FAHD1Q6P587 224 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 UTP4Q969X6 686 aaKnown RBP20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 RTL8AQ9BWD3 113 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 YIPF3Q9GZM5 350 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 ABCB9Q9NP78 766 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 H2AFY2Q9P0M6 372 aaPredicted RBP20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 ZNF391Q9UJN7 358 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 LRP12Q9Y561 859 aa20.55■□□□□ 0.88
TNFRSF4-201ENST00000379236 IGHV3OR16-10A0A075B7F0 116 aa20.54■□□□□ 0.88
TNFRSF4-201ENST00000379236 G3V2T6 193 aa20.54■□□□□ 0.88
TNFRSF4-201ENST00000379236 GYPAP02724 150 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms