RNA–Protein interactions for RNA: ENST00000378307.9

RAB4B-202, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB4B, Length 890 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-202ENST00000378307 TEX12Q9BXU0 123 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 YIPF3Q9GZM5 350 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 SLC22A4Q9H015 551 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 OR10A2Q9H208 303 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 OPA3Q9H6K4 179 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 LAMP5Q9UJQ1 280 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 POLR3KQ9Y2Y1 108 aaPredicted RBP12.87□□□□□ -0.35
RAB4B-202ENST00000378307 PPIAL4AQ9Y536 164 aa12.87□□□□□ -0.35
RAB4B-202ENST00000378307 MAGEB4O15481 346 aaPredicted RBP12.86□□□□□ -0.35
RAB4B-202ENST00000378307 FOXH1O75593 365 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 GRPP07492 148 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 FCGR1AP12314 374 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 DDOSTP39656 456 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 SFRP4Q6FHJ7 346 aaPredicted RBP12.86□□□□□ -0.35
RAB4B-202ENST00000378307 MEPCEQ7L2J0 689 aaKnown RBP12.86□□□□□ -0.35
RAB4B-202ENST00000378307 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 MUC20Q8N307 709 aaPredicted RBP12.86□□□□□ -0.35
RAB4B-202ENST00000378307 DEFB108BQ8NET1 73 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 OR8B12Q8NGG6 310 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 OR52H1Q8NGJ2 320 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 ERGIC1Q969X5 290 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 C7orf69Q9H7B7 122 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 METRNQ9UJH8 293 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 RHBDD3Q9Y3P4 386 aa12.86□□□□□ -0.35
RAB4B-202ENST00000378307 LRRC30A6NM36 301 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 A8MXK9 166 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 C3orf80F5H4A9 247 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 FSTL3O95633 263 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 APOC1P02654 83 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 RPS2P15880 293 aaKnown RBP12.85□□□□□ -0.35
RAB4B-202ENST00000378307 CD80P33681 288 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 PSMA6P60900 246 aaKnown RBP12.85□□□□□ -0.35
RAB4B-202ENST00000378307 PAX2Q02962 417 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 OR8B8Q15620 311 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 KRT77Q7Z794 578 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 BOLLQ8N9W6 283 aaKnown RBP12.85□□□□□ -0.35
RAB4B-202ENST00000378307 TMEM158Q8WZ71 300 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 FGF23Q9GZV9 251 aaPredicted RBP12.85□□□□□ -0.35
RAB4B-202ENST00000378307 SP140LQ9H930 580 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 FN3KRPQ9HA64 309 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 ADGRL4Q9HBW9 690 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 C1orf123Q9NWV4 160 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 FAM206AQ9NX38 181 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 RNF7Q9UBF6 113 aa12.85□□□□□ -0.35
RAB4B-202ENST00000378307 PPIAL4CA0A0B4J2A2 164 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 ANKRD30BLA7E2S9 258 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 J3QLI3 93 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
RAB4B-202ENST00000378307 FCN3O75636 299 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 RGS9O75916 674 aaPredicted RBP12.84□□□□□ -0.35
RAB4B-202ENST00000378307 FSHBP01225 129 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 IRF2P14316 349 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 EGR1P18146 543 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 CSNK2BP67870 215 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 LCN1P1Q5VSP4 162 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 NXNL2Q5VZ03 156 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 ZNF841Q6ZN19 808 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 C1QL2Q7Z5L3 287 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 C1orf87Q8N0U7 546 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 GCSAMQ8N6F7 178 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 PLPP7Q8NBV4 271 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 OR11L1Q8NGX0 322 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 SPATA3Q8NHX4 192 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 UBE2FQ969M7 185 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 DACT3Q96B18 629 aaPredicted RBP12.84□□□□□ -0.35
RAB4B-202ENST00000378307 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 APOL4Q9BPW4 351 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 GABARAPL3Q9BY60 117 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 RIBC2Q9H4K1 309 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 OCEL1Q9H607 264 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 MIOXQ9UGB7 285 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 NOP16Q9Y3C1 178 aaKnown RBP12.84□□□□□ -0.35
RAB4B-202ENST00000378307 INSIG2Q9Y5U4 225 aa12.84□□□□□ -0.35
RAB4B-202ENST00000378307 SRSF10O75494 262 aaKnown RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 VENTXO95231 258 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 LHBP01229 141 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ZNF12P17014 697 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 GATA3P23771 443 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 PSMB10P40306 273 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 CXCR4P61073 352 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ELF3P78545 371 aaPredicted RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ROM1Q03395 351 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 MFGE8Q08431 387 aaPredicted RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 POU4F2Q12837 409 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ZNF154Q13106 437 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ESCO2Q56NI9 601 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 DMRTC1Q5HYR2 192 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 KCTD18Q6PI47 426 aaPredicted RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 PLEKHG7Q6ZR37 379 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 SSX6Q7RTT6 188 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ZNF679Q8IYX0 411 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 SPERTQ8NA61 448 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 OR1M1Q8NGA1 313 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 ITPKCQ96DU7 683 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 NEIL1Q96FI4 390 aaPredicted RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 CNN2Q99439 309 aaKnown RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 SSBP3Q9BWW4 388 aaPredicted RBP12.83□□□□□ -0.36
RAB4B-202ENST00000378307 RGCCQ9H4X1 137 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 NIPAL2Q9H841 368 aa12.83□□□□□ -0.36
RAB4B-202ENST00000378307 H2AFY2Q9P0M6 372 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms