RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PMS2P2O95744 297 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 SPNP16150 400 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 THBS4P35443 961 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 GUCA2AQ02747 115 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 PCOLCEQ15113 449 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 SLC26A10Q8NG04 563 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 VOPP1Q96AW1 172 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 GPX7Q96SL4 187 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-202ENST00000377797 MRPS18BQ9Y676 258 aaKnown RBP12.89□□□□□ -0.35
TCOF1-202ENST00000377797 TRIM64A6NGJ6 449 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 RECKO95980 971 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 OPRM1P35372 400 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 TGIF1Q15583 401 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 C3AR1Q16581 482 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 CD276Q5ZPR3 534 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 LHFPL2Q6ZUX7 228 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 OR6S1Q8NH40 331 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 RTL8AQ9BWD3 113 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 RTTNQ86VV8 2226 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 THADAQ6YHU6 1953 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF816-ZNF321PA0A0X1KG74 233 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 SIX6O95475 246 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 TGM1P22735 817 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 SOX8P57073 446 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 CFHR1Q03591 330 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF687Q8N1G0 1237 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 RFLNBQ8N5W9 214 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 ABHD3Q8WU67 409 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 APOBEC3DQ96AK3 386 aaPredicted RBP12.89□□□□□ -0.35
TCOF1-202ENST00000377797 HINT2Q9BX68 163 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 UFSP2Q9NUQ7 469 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 UTRNP46939 3433 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 CRYAAP02489 173 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 PAN3Q58A45 887 aaKnown RBP12.89□□□□□ -0.35
TCOF1-202ENST00000377797 OR2M7Q8NG81 312 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF385AQ96PM9 386 aaKnown RBP12.89□□□□□ -0.35
TCOF1-202ENST00000377797 ABHD1Q96SE0 405 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 OCSTAMPQ9BR26 566 aa12.89□□□□□ -0.35
TCOF1-202ENST00000377797 PLXNA4Q9HCM2 1894 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 SDCBPO00560 298 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-202ENST00000377797 ZNF728P0DKX0 622 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 TSC22D1Q15714 1073 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 SPATA46Q5T0L3 261 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 HAGHLQ6PII5 290 aaPredicted RBP12.88□□□□□ -0.35
TCOF1-202ENST00000377797 OR10R2Q8NGX6 335 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 ANGPTL4Q9BY76 406 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 DOCK9Q9BZ29 2069 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 FAM221AA4D161 298 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 PRKACAP17612 351 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 HAAOP46952 286 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 FABP6P51161 128 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 CLDN20P56880 219 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 OR8G1Q15617 311 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 LTC4SQ16873 150 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 GSG1Q2KHT4 349 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 SLC7A5P1Q8MH63 180 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 GHRLQ9UBU3 117 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 CRYABP02511 175 aaKnown RBP12.88□□□□□ -0.35
TCOF1-202ENST00000377797 TRAPPC2P0DI81 140 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 TRAPPC2BP0DI82 140 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 COX6A1P12074 109 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 BEX5Q5H9J7 111 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 MAFIPQ8WZ33 124 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 H7C2Y5 167 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 LSM6P62312 80 aaKnown RBP12.88□□□□□ -0.35
TCOF1-202ENST00000377797 PDZD9Q8IXQ8 264 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 ZDHHC23Q8IYP9 409 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 RDH5Q92781 318 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 CMTM3Q96MX0 182 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 SPACA1Q9HBV2 294 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 KLHDC2Q9Y2U9 406 aa12.88□□□□□ -0.35
TCOF1-202ENST00000377797 HS3ST1O14792 307 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 DHRS3O75911 302 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 TXNDC12O95881 172 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 DDOSTP39656 456 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 KISS1Q15726 138 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR2A2Q6IF42 318 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR52N4Q8NGI2 321 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 RGCCQ9H4X1 137 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 ATG12O94817 140 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 PRSS12P56730 875 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 SNRPNP63162 240 aaKnown RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR1S1Q8NH92 325 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 GON7Q9BXV9 100 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 DEGS1O15121 323 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 SPRY1O43609 319 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 GLSO94925 669 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 IFNA5P01569 189 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 CD82P27701 267 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 AGFG1P52594 562 aaKnown RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 NANOS3P60323 173 aaKnown RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 TUSC5Q8IXB3 177 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 KISS1RQ969F8 398 aaPredicted RBP12.87□□□□□ -0.35
TCOF1-202ENST00000377797 POFUT1Q9H488 388 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 ST3GAL6Q9Y274 331 aa12.87□□□□□ -0.35
TCOF1-202ENST00000377797 A0A1W2PR80 420 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms