RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 RTN4IP1Q8WWV3 396 aaPredicted RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 IP6K3Q96PC2 410 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 C5orf49A4QMS7 147 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 M0R135 149 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 PVRP15151 417 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 CLN3Q13286 438 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM25Q86YD3 366 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 PELI1Q96FA3 418 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF799Q96GE5 643 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 ALDOCP09972 364 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 PGA3P0DJD8 388 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 MMP15P51511 669 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 UBE2MP61081 183 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 VMA21Q3ZAQ7 101 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 Q56UQ5 140 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 WDR31Q8NA23 367 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 MARCH5Q9NX47 278 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 RHOBP62745 196 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 CTU1Q7Z7A3 348 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 CARFQ8N187 725 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 SIRPB1O00241 398 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 EIF4E2O60573 245 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 PRSS56P0CW18 603 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 CSNK1DP48730 415 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 ADIPOQQ15848 244 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 RBM14Q96PK6 669 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 RNF2Q99496 336 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 TIAM2Q8IVF5 1701 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 FITM1A5D6W6 292 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 G3V3Y1 287 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 CD226Q15762 336 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 C3orf30Q96M34 536 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF552Q9H707 407 aaPredicted RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 SLC5A6Q9Y289 635 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 NPY5RQ15761 445 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 IGFBP7Q16270 282 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 OR2A2Q6IF42 318 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 OR5AS1Q8N127 324 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 LSMEM1Q8N8F7 131 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 OR1N2Q8NGR9 330 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 TLCD2A6NGC4 264 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 IFITM5A6NNB3 132 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 AP4M1O00189 453 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 OR2B11Q5JQS5 317 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 ERASQ7Z444 233 aa10.58□□□□□ -0.72
VPS13A-205ENST00000376636 COL14A1Q05707 1796 aaKnown RBP10.58□□□□□ -0.72
VPS13A-205ENST00000376636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 DNASE2O00115 360 aaPredicted RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CDCA4Q9BXL8 241 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 GPR87Q9BY21 358 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 WSB1Q9Y6I7 421 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 MYADML2A6NDP7 307 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 PFN4Q8NHR9 129 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 ZNF775Q96BV0 537 aaPredicted RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 LYRM4Q9HD34 91 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CYBAP13498 195 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 NAT1P18440 290 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 OR10A7Q8NGE5 316 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 SLC7A10Q9NS82 523 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 FABP2P12104 132 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 ZBTB25P24278 435 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 PKIAP61925 76 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 ACSM6Q6P461 480 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 PLPP6Q8IY26 295 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 ZDHHC16Q969W1 377 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 RSG1Q9BU20 258 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 LMX1BO60663 402 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CST4P01036 141 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 KRASP01116 189 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 EVX2Q03828 476 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 C11orf87Q6NUJ2 197 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 UBTD2Q8WUN7 234 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 HHIPQ96QV1 700 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 RAB40CQ96S21 281 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 LAMB1P07942 1786 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 OR2J2O76002 312 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 TGIF2LXQ8IUE1 241 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 DUS3LQ96G46 650 aaKnown RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 NACAE9PAV3 2078 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 B4DEV8 164 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 RBP4P02753 201 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CLEC12BQ2HXU8 276 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 NHSL2Q5HYW2 709 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 MOGAT1Q96PD6 335 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 ST3GAL6Q9Y274 331 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CORTO00230 105 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 TMEM102Q8N9M5 508 aaPredicted RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 MDGA1Q8NFP4 955 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CD207Q9UJ71 328 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CEBPDP49716 269 aaPredicted RBP10.57□□□□□ -0.72
VPS13A-205ENST00000376636 OR6S1Q8NH40 331 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 MYOZ3Q8TDC0 251 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 UQCC1Q9NVA1 299 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 CLEC2DQ9UHP7 191 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 TMED3Q9Y3Q3 217 aa10.57□□□□□ -0.72
VPS13A-205ENST00000376636 LIPAP38571 399 aa10.56□□□□□ -0.72
VPS13A-205ENST00000376636 HIST3H3Q16695 136 aa10.56□□□□□ -0.72
VPS13A-205ENST00000376636 OR52N4Q8NGI2 321 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms